KEGG   Nicotiana sylvestris (wood tobacco): 104219352
Entry
104219352         CDS       T05026                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:nsy03016]
    104219352
Enzymes [BR:nsy01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     104219352
Transfer RNA biogenesis [BR:nsy03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    104219352
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH zf-CCCH_4 zf_CCCH_4 zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 104219352
NCBI-ProteinID: XP_009768328
UniProt: A0A1U7VPK1
LinkDB
Position
1:184001847..184007228
AA seq 706 aa
MENETLTDSSPAATTTEHPEAPVQQPSSNTDDGGVSQPFRTPEELVAKAIAPVKREYLRP
PPSRPSNNKDSNNSTVGVENDDAAEAKSAPILKEKKSKRQIKRERRQEQKSPLHICPEVA
KTGKVSACPYSDKCRFSHDLEAFKAEKPADIEGSCPFLVYEGPCPYGLACRFAGTHEDDV
STQTEKISRKSSELNFFNKDTQKLLWKNKMKFPKAEATLKLLGLKGHPKDKILVDKEENG
EVVLKEPATDTKTDSNEAASDCSNKVEITPSISPEDDVVENNLADDIRPLKKAKSSIDEI
CSSQASNGSSVQGEVLDSNCDVNKSDPTADMVTDSDKSLKLHPREKKLIDFRDKLYLAPL
TTVGNLPFRRVCKVLGADVTSGEMAMCTNLLQGQASEWALLRRHSSENLFGVQICGAYPD
TVTKTVELIEQECSVDFIDINMGCPIDIVVNKGAGSALLTKPMRMKSVVEAASATVDIPI
TIKVRTAYFEGKNRIDSLIADIGNWGATAVTIHGRSRQQRYSKLADWDYIYQCVQRAPKS
LQVLGNGDVFSYLDWNKHKTDSPELSTCMIARGALIKPWIFTEIKEQRHWDITSGERLDI
LKDYARFGLEHWGSDSKGVETTRHFLLEWLSYTCRYVPVGLLEIIPQRINWRPPSYYGRD
DLETLMASDSAADWIRISEMLLGKVPAGFSFAPKHKSNAYDRAENG
NT seq 2121 nt   +upstreamnt  +downstreamnt
atggaaaacgaaaccctaacggactcgtcgccggcggcgactacgacggagcatccggaa
gctccagtacaacaaccttcatcgaacaccgatgacggaggagtaagtcaaccatttaga
actccagaagagttagtagctaaagccatagctcctgtgaagagggagtatcttcgccct
ccaccatctagaccttcaaacaacaaagacagcaacaacagcaccgtcggagtcgaaaac
gacgatgcagctgaggccaaaagcgctcctattcttaaggagaagaaatccaaacgccaa
attaaacgtgaacgccgtcaggaacaaaaatcaccattgcatatctgtcccgaggtggcc
aaaactggaaaagttagtgcgtgcccctatagtgacaaatgtcggtttagtcatgacttg
gaagcttttaaagctgagaaaccagctgatatagagggtagttgcccttttctagtttat
gaagggccatgcccttatggattggcttgtaggtttgcagggacccacgaagatgatgtt
tcaactcaaactgagaagatatctaggaagagttctgaactaaatttttttaataaggac
actcagaaacttctgtggaaaaacaaaatgaagtttccgaaggctgaagccactctcaaa
cttcttggacttaagggccatccgaaagataaaatattggttgataaagaggaaaatggc
gaagttgtgctaaaagagccagccactgataccaaaacagacagcaatgaagctgctagt
gactgctctaataaagtggagatcactccttccatttcaccagaagatgatgtagttgaa
aataatttggctgatgatattagacctttaaaaaaggcaaaatcatcaatcgatgaaatt
tgttcctcccaagctagcaatggttcaagtgtccagggggaagttcttgacagcaattgt
gacgtgaataaatcagacccaactgctgacatggttaccgattctgataaaagcctaaaa
ttgcacccccgtgaaaaaaagcttattgattttcgggataagctctatcttgcgcctttg
accacagttgggaatctgccttttcggagagtttgcaaggtactaggagctgatgtaaca
tctggtgagatggcaatgtgcacaaatcttttgcaggggcaagcatctgagtgggcactg
ctgagacggcattcttccgagaatttgtttggtgttcagatttgtggagcttatccagac
actgttacaaagacagttgagcttatagaacaagaatgctctgtggatttcattgatatt
aacatgggatgcccgattgatattgtagttaacaagggtgctggatcagctcttcttaca
aaaccaatgcggatgaagagtgtagtagaagctgcttcagcaacagttgatataccaata
actatcaaggtaagaactgcttattttgagggaaagaatcgcattgattctctcatagca
gatattggtaattggggtgcaactgcagttaccatacatggtagatcacgtcaacagcgc
tatagtaaacttgctgactgggattacatataccaatgtgtacaaagagcccccaagtct
ttacaagtccttggaaacggtgatgtattttcttatttagactggaacaagcacaaaact
gactcccctgagctttccacatgtatgatcgcccgaggtgcattgataaagccgtggata
tttaccgaaatcaaggaacagaggcactgggacattacatctggggagcggctagatatc
ttgaaggattacgcacgatttggccttgaacactggggttctgattcaaaaggagtggag
acgaccagacactttttgttggagtggcttagttacacatgtcggtatgttccagttggc
ctgttagaaattatcccacaaagaataaattggcgaccaccctcatactacggtagggat
gacctcgagacactaatggcctctgattctgctgcagactggataaggatatccgaaatg
ttactaggcaaggttcctgctggcttttcgtttgcaccaaagcacaagtccaatgcttat
gacagagcagagaatggctaa

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