Nicotiana sylvestris (wood tobacco): 104219358
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Entry
104219358 CDS
T05026
Name
(RefSeq) uncharacterized protein isoform X1
KO
K24737
WD repeat-containing protein 6
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nsy04990
]
104219358
Domain-containing proteins not elsewhere classified [BR:
nsy04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
104219358
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_Gbeta
DSE1_N
Motif
Other DBs
NCBI-GeneID:
104219358
NCBI-ProteinID:
XP_009768334
UniProt:
A0A1U7W125
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All DBs
Position
9:complement(109255402..109275694)
Genome browser
AA seq
1373 aa
AA seq
DB search
MAEQSSCCLQRGQYLGEISALCFLHLPPDFSSLPFLLAGTGSQILVYDLTTGKMIKSFDV
FDGIRVHGVSLQTFNEHLSGSHVTLNIAVYGERRVKVFSLQIQRVSNSQTEQQACFHLTL
SLLLLLPKFSHWVLDVSFLKWDGATSSNNGDCLAIGCSDNSVHIWDMLRCSLLSRVRCSE
RCLLYSMRIWGDDVGSLRVASGTILNEVLVWKVGCKAAPDVIGSPTEDVLHLTSHEGRQL
PCQQYEAVNICKLIGHEGSIFRLAWSADGFKIVSVSDDRSARIWTLGANGSNHVVDSVLF
GHSARIWDCYIFDSLIITAGEDCTCRVWGMDGTQLTRIREHVGRGIWRCLYDPDAALLVT
AGFDSAIKVHLQGSFSNGSERGIAEVQDSTVQKEEFALYIPNFREHDGLLNSKSEYVRCL
HFSREDSLYVATNNGYVYHAKLYDTEDVKWTELLHIEEEGPIVCMDLLSHCSDVTEDIEN
WVAVGNGKGTMVIARVVDNVLNPRVELMSTWSAEPERQLLGTYWCKSLGPKFLFTSDPRG
TLKLWRLFNPLPSVSQDVMRSCCVSLIAEFRSCFGMRIMCLDASVENEVLVCGDIRGNLL
LFPLQRDILFSMSTASEINISPFSNFRGAHGISTVCSISIASFGPTQLEIHSTGGDGCIC
YFEHDRSRHNLEFVGIKQVKELSTVRSIFTNADQQGDLPGSSCAIGFSSSDFIIWNLFSE
TKVLQVTCGGWRRPHSYFLGDVPEMKNCFAYVKDGIIYVHRHWVNTSERVMYPKNLHLQF
HGREIHTLCFISQDSSCSLNEKQDIFSEMIWVATGCEDGTVRLTRYASEIENWSTSKLLG
EHVGGSAVRSIFFVSRLHRMVLDENDMPDSVNSEKGFLEDPEDLSLLISVGAKRVVSAWK
QKSKMRIREGTFDPECNIRNDFQWLSTDMPTRERNHGKLQNNKKVSEMVKNGGSLPSEDK
RSYSEPCVPDICDNDWRYLAVTAFLAQVAGTRCSVCFVVVACSDATVTLRALLLPYRLWF
DVALLTPLSSPVLALQHIIVPTYPQLQGNVRFGSRYIIISGSTDGSIAFWDLTEHVESFM
RQLSAVQIRKGLDSQKRPRTGRGSQGGRQWRSLGSQVSNKITGEEQLLGVPVTKGKPDNG
LSATTVPGTDKTVQDHTLRGISHLVENTHAFSPDTFTGIKEVLHKAWPLHIFKNVHQSGV
NCLHVSVIKGPEVSDSRFTFCVLSGGDDQSLNCLRLDFSLKSLRPSCESSTSEQHSTTGS
LSVGGHVHHYEVGNYDMRFALLDKVMSAHSSAVKGVWTDGCWVFSTGLDQRIRCWHLEQQ
GKLTEHKHMVVSVPEPEALDARACGRNHYQIAVAGRGMQMFDFVAPDDMKGGN
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcaaagcagctgttgcctccaaagagggcagtaccttggagaaatctctgcc
ctttgctttctacaccttcctcctgacttctcttctcttccttttcttctagctggaact
ggttcacaaattcttgtctacgatttaacgactgggaagatgataaaatcatttgatgtg
tttgacggaattcgagtgcatggagtttctttgcagacatttaacgaacacttgtcgggt
tcacatgttactttaaatatcgcagtctatggtgagaggagagttaaagttttcagcttg
caaattcagagggtctctaattctcaaactgagcaacaagcatgttttcatttaacttta
agtctcctgctcctgttacctaagtttagccactgggttttggacgttagctttttgaag
tgggatggtgctacttcttcaaacaatggtgattgtcttgccataggatgcagtgacaat
tctgtacatatttgggatatgttgagatgttctctcctttccagagtaagatgctcagaa
aggtgtttgttgtactccatgaggatttggggcgatgatgttggatctctccgtgtagca
tctggcactatccttaatgaggttcttgtttggaaagtgggttgtaaggctgctcctgat
gttattggaagccctacagaagacgttttacatttgaccagtcacgagggtcgccagctt
ccttgtcagcaatatgaagctgtaaatatatgtaaactaattggacatgaaggttcaatt
ttccgccttgcatggtctgctgatggatttaaaatagtatctgtatctgatgatcgaagt
gctcgtatctggacgcttggtgctaatggttccaaccacgtggttgactctgtcttattt
ggtcacagtgctagaatttgggactgctatatatttgactctttaatcataactgctggc
gaggattgcacgtgtcgtgtatggggaatggatggcacacaacttacaagaatcagggag
catgttggaagggggatctggcgatgtctctatgatcctgatgcagcactccttgtgact
gcgggatttgattctgcaataaaagtacatctgcaaggatcgttttctaatgggtcagaa
agaggtattgcggaagtacaagactcaactgtccaaaaggaggaatttgctctctatatt
ccaaattttagagagcatgatggcctcttgaacagcaaaagcgaatatgtaagatgcttg
catttttctcgggaagattctctttatgttgccacaaacaatggatatgtgtaccatgct
aaactatatgatactgaggatgtgaaatggactgagcttctccatattgaggaggaagga
ccaattgtttgcatggatttgttgtcacactgttctgatgttactgaagacattgaaaat
tgggttgctgttggcaatggtaaaggcactatggtgattgccagagttgttgataatgtc
ttgaatcctcgagttgaactcatgtctacatggtcagctgaaccagagaggcaactactt
gggacttattggtgcaaatctttgggacccaagttcctcttcacttctgatcctagaggc
acattgaaactatggaggttgttcaaccctttgccctctgtttctcaggatgtcatgaga
agttgttgtgtttctttaatagcagaattccgctcatgctttggaatgcggataatgtgc
ttggatgcatcagtagagaatgaggtcctagtgtgcggtgacattcgtggtaatctttta
ttgtttccgttgcaaagagacattctttttagtatgtctacagcttccgaaataaatata
agtcctttcagcaacttcagaggagctcatggaatatcaactgtgtgtagcatctccatt
gctagttttggtcctacacaacttgaaattcattcaactggaggagatgggtgcatatgc
tactttgaacatgatagaagtcgtcataacttggaattcgtagggatcaagcaagtgaaa
gagctaagtacagtacgatcaatcttcactaatgctgaccaacaaggcgatttacctgga
agcagttgtgcaataggattttcttcatcagactttatcatatggaatttattttccgag
acaaaggttttgcaagtaacctgtggtggatggaggcgtcctcattcttattttcttggt
gatgtaccagagatgaaaaattgctttgcctatgtcaaggatggaattatttatgttcat
agacactgggtgaacactagtgagagggttatgtatcccaaaaatcttcatttgcaattc
catggcagggagatacataccttatgttttatctctcaagattcatcgtgcagtctaaat
gaaaagcaggatattttttctgaaatgatttgggttgcaacaggttgtgaagatggaact
gtgagactgacaaggtatgcttcagaaattgaaaattggtcaacttccaagctgcttggt
gaacatgttggcggatcagctgtgagatctatattttttgtctcaaggctacatagaatg
gtgctggatgaaaatgacatgcctgacagcgttaacagtgaaaaaggttttttagaggac
ccggaggatctttcattactaatatcagtaggtgcaaaaagggtggtatctgcttggaag
caaaaaagtaagatgagaattagggaaggaacctttgacccagagtgcaacattagaaat
gatttccagtggctttctactgatatgccaaccagagaaaggaatcatggaaaactacaa
aacaataaaaaagttagtgaaatggtaaaaaatggtggatcacttccctcagaagacaag
agaagctattcagaaccatgtgtaccagatatatgtgacaatgattggagatatctcgca
gttactgcttttcttgctcaagttgcaggcacaaggtgttcagtctgtttcgtagttgtt
gcatgttcagatgccacagttacactacgagctcttttactaccctaccgactctggttt
gatgttgctttactgactcctttgtcatctccggtgcttgctttgcaacatatcattgtt
cctacatatccccaacttcaaggcaatgttcggtttggaagtcggtatattattattagt
gggtctactgatggaagtattgccttttgggatcttacggaacatgttgaaagttttatg
cggcaattatcagcagttcaaatcagaaaaggtctagacagccagaaaagaccacgtaca
ggtagaggaagccaaggtggacggcagtggagatcattgggcagtcaagtgtctaataaa
ataacaggtgaggaacaattgttgggagttcctgttacaaaggggaagcctgataatggt
ttgagtgcgacaactgtcccaggaactgacaaaactgtgcaagatcacactctgcgaggg
atatctcatttggtagaaaatacacatgcattttctccagacaccttcactggcataaag
gaagtattacacaaagcatggcccttgcatatcttcaagaatgtccaccagtcaggggtc
aactgtcttcatgtttcagttataaaaggtcctgaagtatctgattcaaggtttacattt
tgtgttttaagtggaggtgacgaccagtcacttaactgtcttagattagatttctctctg
aaatcgttgaggccgagttgtgaaagttcgacttcggagcaacatagcaccactggatca
ctgagtgtaggcggtcatgttcaccattatgaagtcggaaattatgatatgagatttgcg
ttgcttgataaagtcatgtcagctcacagctctgcggttaaaggtgtttggaccgatggt
tgttgggtattttctacgggtcttgatcagcgcatcaggtgttggcatctcgaacagcaa
ggcaaactaactgagcacaaacatatggttgttagtgtaccggagcctgaggcattggat
gctagggcctgtggaaggaaccattatcagattgcagtcgctgggaggggaatgcaaatg
tttgattttgttgcacctgatgacatgaagggtggaaattaa
DBGET
integrated database retrieval system
