Nicotiana sylvestris (wood tobacco): 104219701
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Entry
104219701 CDS
T05026
Name
(RefSeq) single-strand DNA endonuclease 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104219701
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104219701
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_N
Chromo_2
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
104219701
NCBI-ProteinID:
XP_070027118
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Position
3:132944617..132958455
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AA seq
597 aa
AA seq
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MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVQLQNVNKSHCAIKDKLYLRGLFHR
LRALTALNCSLIFVTDGAIPAIKSSTYRKRLNPGNVLTQDEAIKPSSIRRNAGSEFSRMI
KEAKVLGNALGIPCLDGIEEAEAQCALLNYESFCDGCFTSDSDAFLFGARTVYRDICLGE
GGYLVCYEMDDIERKLGLGRNSLITLAVILGGDYSEGVYGLGRESACQIVKSIGDSAVLQ
WIASEGFSFVKKQKGSKKQTENDKCNGRENAAEYKNPNGSKCPSLMKIQTLQVLNAYLKP
KCHSAESDAVQRILALYPYSRSQLQQICTEFLDWPPEKTDEYILPKIAERELRRFANLRS
TASQVGVQLPLNEMPIKCPLSRIIKPRKVQGVDCFEVSWEEMDGLETSIVPADLVQRACP
ERILEFQERRAQGKKRNNTRPRRPRLEKTPPLGQIDQKLEDLLLEVDQESSLADDATVLC
GSVSGDDESIAQIHVDSSIQTHSTWNGNSVNKGFASGRAYCQEDDILPALSKAEVIDLTS
PPPVRHASGKSKHQDDNVECINVVELSDSENDMFSPEHIRRARELRMFIAGIKDNLY
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtaaagaacctttgggacatcttagaatcttgcaagaaaactcttcctcttcat
catctccagaacaagagggtatgtatagatctttcttgctggatagttcaacttcaaaat
gtcaacaaatcccactgtgccatcaaagacaagctttatctcaggggtctcttccaccgc
cttagagctctcactgctttgaattgtagcctcatttttgtcaccgatggagccattcct
gctatcaaatcatctacttatagaaagcgactaaatcctggaaatgtgctcactcaagat
gaggcgattaaaccgtcatcaatacgaagaaatgcaggatctgaattttcacgcatgata
aaggaggctaaagttcttggaaatgcacttggaattccgtgcttagatgggattgaggag
gctgaagctcaatgcgcactattaaactatgaatcattctgtgatggatgtttcacatca
gattctgatgccttcttatttggggcaaggacagtgtatagagatatttgccttggggaa
ggtgggtatcttgtttgctatgaaatggatgatattgagagaaagcttggacttggaagg
aactccttgataacgctggctgttattcttggtggtgattactctgaaggagtttatggg
cttggtcgggaatcagcttgtcagattgttaaatcaattggtgatagtgctgttcttcaa
tggattgcatcagaaggattttcctttgtaaagaagcaaaaaggttctaagaaacagact
gaaaatgacaaatgcaatggtagagaaaatgctgcagagtataaaaatcctaatggaagc
aaatgcccttcactaatgaaaattcagacgttgcaagtattaaatgcatatctgaaacca
aagtgccattcagcagaatctgatgctgtacaacggattcttgcattgtatccatatagc
cgcagccagcttcagcaaatatgcactgaatttcttgattggcctcctgagaagacagac
gagtatatccttccgaagattgctgaaagggaactgcggagattcgccaacttgcggtcc
actgcatcacaagtgggagtccagcttccattgaatgagatgccaataaagtgtccttta
tctcgaattataaagccgaggaaagttcaaggagtagattgctttgaggtatcttgggaa
gaaatggatggacttgaaacctctatagtaccagctgatctcgttcagagggcttgtccg
gaaaggattttggagttccaggaaagacgagctcaaggaaagaaaagaaataatactaga
ccaagacgacctagactagagaaaacgccaccattgggtcagatagatcaaaaactcgaa
gacctcttgcttgaggttgatcaagaaagctctctcgctgacgatgccacagttttatgt
ggatcagtatcaggggatgatgaaagcattgctcaaattcatgtagactcaagcatacag
acacatagtacgtggaatggcaacagtgtcaacaagggttttgcttctgggagagcttat
tgccaagaggacgacattttaccagctttatctaaagctgaagtaattgatctcacaagt
cctccaccagtgcggcatgcttctgggaaatctaaacaccaagatgacaacgttgaatgc
attaatgtagttgagcttagtgattcagaaaatgatatgttttcccctgaacatataagg
agagccagagaactgagaatgttcattgcgggaattaaggacaacctctactga
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