KEGG   Nicotiana sylvestris (wood tobacco): 104219701
Entry
104219701         CDS       T05026                                 
Name
(RefSeq) single-strand DNA endonuclease 1
  KO
K15338  holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nsy03400]
    104219701
DNA repair and recombination proteins [BR:nsy03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     104219701
SSDB
Motif
Pfam: Chromo_SEND1 XPG_I XPG_N Chromo_2 XPG_I_2
Other DBs
NCBI-GeneID: 104219701
NCBI-ProteinID: XP_070027118
LinkDB
Position
3:132944617..132958455
AA seq 597 aa
MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVQLQNVNKSHCAIKDKLYLRGLFHR
LRALTALNCSLIFVTDGAIPAIKSSTYRKRLNPGNVLTQDEAIKPSSIRRNAGSEFSRMI
KEAKVLGNALGIPCLDGIEEAEAQCALLNYESFCDGCFTSDSDAFLFGARTVYRDICLGE
GGYLVCYEMDDIERKLGLGRNSLITLAVILGGDYSEGVYGLGRESACQIVKSIGDSAVLQ
WIASEGFSFVKKQKGSKKQTENDKCNGRENAAEYKNPNGSKCPSLMKIQTLQVLNAYLKP
KCHSAESDAVQRILALYPYSRSQLQQICTEFLDWPPEKTDEYILPKIAERELRRFANLRS
TASQVGVQLPLNEMPIKCPLSRIIKPRKVQGVDCFEVSWEEMDGLETSIVPADLVQRACP
ERILEFQERRAQGKKRNNTRPRRPRLEKTPPLGQIDQKLEDLLLEVDQESSLADDATVLC
GSVSGDDESIAQIHVDSSIQTHSTWNGNSVNKGFASGRAYCQEDDILPALSKAEVIDLTS
PPPVRHASGKSKHQDDNVECINVVELSDSENDMFSPEHIRRARELRMFIAGIKDNLY
NT seq 1794 nt   +upstreamnt  +downstreamnt
atgggcgtaaagaacctttgggacatcttagaatcttgcaagaaaactcttcctcttcat
catctccagaacaagagggtatgtatagatctttcttgctggatagttcaacttcaaaat
gtcaacaaatcccactgtgccatcaaagacaagctttatctcaggggtctcttccaccgc
cttagagctctcactgctttgaattgtagcctcatttttgtcaccgatggagccattcct
gctatcaaatcatctacttatagaaagcgactaaatcctggaaatgtgctcactcaagat
gaggcgattaaaccgtcatcaatacgaagaaatgcaggatctgaattttcacgcatgata
aaggaggctaaagttcttggaaatgcacttggaattccgtgcttagatgggattgaggag
gctgaagctcaatgcgcactattaaactatgaatcattctgtgatggatgtttcacatca
gattctgatgccttcttatttggggcaaggacagtgtatagagatatttgccttggggaa
ggtgggtatcttgtttgctatgaaatggatgatattgagagaaagcttggacttggaagg
aactccttgataacgctggctgttattcttggtggtgattactctgaaggagtttatggg
cttggtcgggaatcagcttgtcagattgttaaatcaattggtgatagtgctgttcttcaa
tggattgcatcagaaggattttcctttgtaaagaagcaaaaaggttctaagaaacagact
gaaaatgacaaatgcaatggtagagaaaatgctgcagagtataaaaatcctaatggaagc
aaatgcccttcactaatgaaaattcagacgttgcaagtattaaatgcatatctgaaacca
aagtgccattcagcagaatctgatgctgtacaacggattcttgcattgtatccatatagc
cgcagccagcttcagcaaatatgcactgaatttcttgattggcctcctgagaagacagac
gagtatatccttccgaagattgctgaaagggaactgcggagattcgccaacttgcggtcc
actgcatcacaagtgggagtccagcttccattgaatgagatgccaataaagtgtccttta
tctcgaattataaagccgaggaaagttcaaggagtagattgctttgaggtatcttgggaa
gaaatggatggacttgaaacctctatagtaccagctgatctcgttcagagggcttgtccg
gaaaggattttggagttccaggaaagacgagctcaaggaaagaaaagaaataatactaga
ccaagacgacctagactagagaaaacgccaccattgggtcagatagatcaaaaactcgaa
gacctcttgcttgaggttgatcaagaaagctctctcgctgacgatgccacagttttatgt
ggatcagtatcaggggatgatgaaagcattgctcaaattcatgtagactcaagcatacag
acacatagtacgtggaatggcaacagtgtcaacaagggttttgcttctgggagagcttat
tgccaagaggacgacattttaccagctttatctaaagctgaagtaattgatctcacaagt
cctccaccagtgcggcatgcttctgggaaatctaaacaccaagatgacaacgttgaatgc
attaatgtagttgagcttagtgattcagaaaatgatatgttttcccctgaacatataagg
agagccagagaactgagaatgttcattgcgggaattaaggacaacctctactga

DBGET integrated database retrieval system