Nicotiana sylvestris (wood tobacco): 104219814
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Entry
104219814 CDS
T05026
Name
(RefSeq) peroxisome biogenesis factor 10 isoform X1
KO
K13346
peroxin-10
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
104219814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104219814
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
104219814
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GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-rbx1
zf-RING_5
Prok-RING_4
U-box
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
104219814
NCBI-ProteinID:
XP_009768856
UniProt:
A0A1U7VV60
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Position
8:complement(178450772..178461239)
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AA seq
396 aa
AA seq
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MGLEEPARTSANAGNSSHGGGASTSGSVKRFPLAAQPEIMRAAEKDDQYASFVYDACRDA
FRHLFGTRVAVAYQNEAKLLGQMLYYMLTTGAGKQTLGEEYCDITQVAGPYGLSPTPARR
ALFIFYQSAVPYIAERVSSRVASRGITLADSMADYTFGDVRSSSNEAEASATVEIQSSST
STPSISALSRLKAKIRDFWLYAVRRWPSVLPLAREVLQLVIRTNLMFFYFEGFYYHISKR
TAGIRYVFIGKPMNQRPRYQILGVFLLIQLCILAAEGLRRSSLSSISASVQQAPFGTYQT
STGRGLPVLNEEGNLITAETGKSGLVESTSTSESQGSSPSKCTLCLSSRQDPTATPCGHV
FCWNCIMEWCNEKPECPLCRSPITHSSLVCLYHSDF
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgggattggaggaacctgctagaacttcagccaatgccggaaacagcagccacggcggc
ggcgcctccacttccggcagcgtgaagaggttcccactggcggcgcagccggagattatg
agagccgccgagaaagatgaccagtatgcctcctttgtctatgacgcttgccgtgatgct
ttccgtcacctcttcggtacaagagtcgctgtagcttaccagaatgaggcaaaactcttg
gggcaaatgctctattatatgctgacaacgggtgcagggaagcaaacattaggagaagaa
tactgtgacatcactcaggttgcaggaccatatgggctttcccccacacctgcaagacgt
gctctttttattttctatcagtcagccgttccatacattgcagaaagagtcagttctaga
gtagcttcccgtggcatcacccttgctgattcaatggccgactatacatttggggacgtt
cgttcttcaagcaacgaagctgaggcatcagcgactgttgagatacagtcatcttcaaca
tccactccatcaatttcagctctttcaagattaaaagccaagataagggatttctggttg
tatgcagttcgaaggtggccttcggtgcttcctcttgctcgtgaggtcttgcaattggtc
atccggaccaatctcatgttcttctattttgaaggattttattatcatatatcaaaacgt
actgcgggcattcgctatgtgttcattggcaaacctatgaaccaacgacctagatatcaa
atactaggggtcttccttctaattcaattatgtattcttgcggctgaaggtctgaggcgt
agtagtttatcatccatttcagcttctgttcaacaagcaccctttggaacctatcagact
tccacaggccgaggtttacctgttttaaatgaggaaggcaatctaattactgctgaaact
gggaagtctgggctggttgaatccacatcaacctcggagtcacaaggaagcagtccaagc
aaatgcacgctttgcctaagcagccgccaagatccaacagccacaccttgtggtcacgtg
ttttgctggaactgcataatggaatggtgcaatgagaagcctgaatgtcctctttgccgt
tctcctataacacattcaagcttagtttgtctgtatcactcagatttttag
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