KEGG   Nicotiana sylvestris (wood tobacco): 104220016
Entry
104220016         CDS       T05026                                 
Name
(RefSeq) glycine-rich RNA-binding protein 4, mitochondrial-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104220016
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nsy03019]
    104220016
   03041 Spliceosome [BR:nsy03041]
    104220016
Messenger RNA biogenesis [BR:nsy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     104220016
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104220016
Spliceosome [BR:nsy03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    104220016
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_RdRP1_2 RRM_occluded RRM_10
Other DBs
NCBI-GeneID: 104220016
NCBI-ProteinID: NP_001289516
UniProt: Q40436
LinkDB
Position
2:132388081..132390410
AA seq 259 aa
MAFVNKIGNMLKQIVSRHANLELCASRTSLYQAIRSMSSSKLFVGGLSWGTDETSLKEAF
SQHGEVIEARVIMDRDTGRSRGFGFVSFTSTEEAASALTALDGQDLHGRQIRVNYATEKL
RGSFGGGYGSGGGYGGGDGSFAGAGGYASSNYGGGGNYGSNNSYPTGGGNYGGGVRYGNG
EGGNDAGGVRQGSFGGGYGGGNSGNYNADFTQGMVNNGVEEQLSADQGTESVNSDFTPGA
EGSYRDDDDEPNGYANSRG
NT seq 780 nt   +upstreamnt  +downstreamnt
atggcttttgtcaataaaattggaaatatgcttaaacagattgtaagcaggcacgcgaac
ttggaactgtgtgcctctagaacatcactttaccaggctataagaagcatgtcttcttca
aagctttttgttggaggtctctcatggggcactgatgaaacctctctgaaagaggcattc
tcacaacatggtgaagtgattgaagctagagttattatggaccgtgacaccggaagatcc
agaggatttggctttgttagttttacgtcaactgaagaagccgcaagtgcattgactgcc
ttggatggccaggatctccatgggagacagataagggttaattatgccacagaaaagctt
cgtggcagttttgggggtggttatggtagcggtggcggatatggtgggggagatggaagt
tttgcaggtgctggaggttatgcatccagcaattatggaggtggtggtaactacggttcc
aacaacagttatcctacaggtggtggcaactatggtggaggagtgcggtatggtaatggt
gaaggtggcaatgatgctggaggtgtcagacaaggcagttttggcggtggatatggtggt
gggaatagtggaaattacaatgctgatttcactcagggtatggtgaacaatggcgtcgaa
gaacagcttagtgcagaccaagggactgaatctgtaaacagtgatttcacaccgggtgct
gaaggaagttacagggatgacgatgatgagccaaatggctatgccaactccaggggttga

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