Nicotiana sylvestris (wood tobacco): 104220024 Help Entry 104220024         CDS       T05026                                  Name (RefSeq) uncharacterized protein   KO K20178   vacuolar protein sorting-associated protein 8 Organism nsy  Nicotiana sylvestris (wood tobacco) Pathway nsy04148   Efferocytosis Brite KEGG Orthology (KO) [BR:nsy00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     104220024  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:nsy04131]     104220024 Membrane trafficking [BR:nsy04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     104220024 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TPR_Vps8 Beta-prop_VPS8 TPR_Vps41 VPS8_N Clathrin WD40_CDC20-Fz ANAPC4_WD40 TPR_VPS8_2 Beta-prop_EML_2 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_EML WD40_Gbeta zf_RING_Vps8 Beta-prop_RIG_2nd Beta-prop_THOC3 Beta-prop_HPS5 WD40_Prp19 WD40_WDHD1_1st WD40 Beta-prop_WDR36-Utp21_2nd zf-RING_2 zf-RING_Vps41 Motif Other DBs NCBI-GeneID:  104220024 NCBI-ProteinID:  XP_009769119 UniProt:  A0A1U7W3B9 LinkDB All DBs Position 5:complement(46526449..46543028) Genome browser AA seq 1902 aa AA seqDB search MELDLDSFLESHADDDDDDHLLRHRTVDEILLNHSSSSSSSSSSSSPSPPSSPSAAHGHN YLDRRSLSVDSSSQSTEPRAKSISSKQSSEFSSPPAGQSVLPPFFNGVIRSNSKPGDALA AAVAASRSIPAPRAAAIKSRRASSAVLQRALESDALPSIAPPTHNETNVSDKNLNTFGRS GFLHEIGSENIDLEVDRKDQFQAAQAQLSDMDKTSREVSTVDAGQDNTSFAGDDVSEMEE FSNKSNLKEAPTYTGTLVEFPTRTEKDLIFNESSGLDEIEDRKVQSLSGGEDNVASADSS EEAATNEILSSPVYGSLSDEDSTEKDGAKHELENVISQSKEEDISSHGDENDSLNDAASI IEELVLQGESMRDSTTPLKKYHSALKPLELAEEAEKKQAFTAMHLEEGAAAQPMRLDGVH RGSNVLGYFDVDDNNTITQTLLSQAFRREHGSSQVLAVHLNYIAVGMSRGSILVMPSRYS PHHADDMDAKMLVFGLPRDRPQVPVTSLSFNQQGDLLFAGYGDGHYTVWDVQRASVLKVV TEHKAPVVHLLYLGQDSQVTRQFNVLSGDTKGVVKLSRFKVLPLINMISLSKSQEILTEN NSTTICAVPLLSGESYGGAMVASLDGGNPSLIEEGVVIFGTHQYALVAKISPTFKVYAKI ARSDGAREGSMPYAAWKKSESMSIETSENVSLLAIAWDRRVQVAKLVKSELKVCWKWTTD SSAVGLAWLDEQILVILTATGRLCLFSKDGNLIHQRSFAMDGSCGDDLMSYHAYFSNAFG NPEKAHHNCLGIRGATLYILRPSQLVVSRLLSWKERIEVLHKGGDWTSALNMAMSLYDGR AQAVIDLPSNLDDVQKTLIPYLVQLLLSYVDEVFSYIAVASGNQHGQSGQSNESKYDANF VHPDIKEQYTVVGGVSVEFCLHIKRLDVLFDEIFPKFDAVNHKDTFLELLEPYILKDMLG SLPPEIMQALVEHYSTKGWLQRVEQCVLHMDMLSLDFNQVVRLCREHMLHGALIYLFNKG LDDFRTPLEELFFILRDSKRESATALGYKMLVYLKYCFQGLAFPPGRGTLPPTRVPSLKR ELVQFLLEEASSPNSSTAMCLPYSVPHPNLLSLLELDTEATLDVFRYAFVEGGNESFSPA WNPANLKTETTEIDILAIEGENLVQKVVDVLAAILDMSYFQTGGSFNSKDERCTDIWPTK KDIEYILDFISFFITFEKATVSKDTLRQILEYLTLGNETYPNVSGRIVETFNRRQKQLTA LLEVLPEEDWDAHYLLNLCERGQLHQVCGLIHAIRHQYLSALDSYMKAVDEPILAFVFID GMLRQTRGKESDAFRSAVISRIPDLLKLNREGTFFLIVNHLGEEKDYILSQLRSNPESLF LYLKALIEVHSTGTLNFSSLRKDNASDFRGSKKLMSSEVYLESLSDLPKLLQNYPIHITD EMTELYIELLCRYEPKSVLGFLETFESYRVERCLRLCQEYGIVDAAAFLLERVGDIGSAL LLVISTLNEKFILLDTAVESKHCDAAPEHFKAILSKKEVTDILDILRTCIGLCQRNSPRL DPDEAESLWFQLLDSFCEPLMDSHDHSKIRYKEEECMQEGQQACKIQWKVSKSHINAHIL RKLLSVFIKEIVEGMIGYVSLPRIILKLLSDNETQEFGDFKPTILGMLGTYDFERRILDT AKSLIEDDTYSSLSLLKRGASHGFAPRSLLCCICNCPLTKDFSASSIQIFSCGHAVHLQC ETQGNEASCRGNSAGCPICMPRKNSERLRSKSVLVENGLVKTLSKSHQTHGMTALHPHEN DGIDNFYGLQSISRFDLLLNLQKNHQSMQIENIPQLRLAPPAVYHEKVKKRNVPSAGESS NGLPKMEKPSRSKHLRDVKLKGSSLRFPLKSNIFGKEKNIKL NT seq 5709 nt NT seq  +upstreamnt  +downstreamnt atggagcttgacctcgattcgtttttagagtcacatgctgatgacgacgacgatgatcac ttactacgtcatcgcactgttgatgaaattctcctcaaccactcctcctcttcttcttct tcttcttcttcttcttcaccttctcctccttcttcgccatctgctgcacatggacacaat tatctagatcgtcgcagtctctctgtagactcgtcttcccaatctacagagccaagagcc aagtcaattagtagcaaacaatccagtgaattttcttcaccaccggcaggccagagtgtg ttgccaccattttttaacggggtcatcagatcaaattcaaagcccggggatgccttggct gcagcagtcgctgcatcacgctccattcctgcacctcgtgcagcagccatcaaatccaga agagcaagctctgcagtgttgcaaagggctttggaaagtgatgcattgccttccatagct cctccaacccataatgaaaccaacgtttcggacaaaaatcttaatacgtttgggcgctca gggtttttacacgagattggttctgagaatattgacttggaagttgacagaaaggatcag tttcaagctgctcaagctcaactaagtgatatggacaagactagtagggaggtttctaca gtggatgcaggtcaggataatacgagctttgctggagatgatgtttctgagatggaagaa ttttcaaataaaagtaatttgaaggaagctccaacttataccggaactctagtggaattt cctactagaactgaaaaagacttgatttttaatgagagctctgggttggatgagattgaa gataggaaagttcaatctttatctggaggtgaagataatgttgcaagtgctgatagcagt gaagaagctgctacaaatgagatactctcttctccagtttatggaagtctttctgatgaa gattcgactgaaaaggatggtgctaaacatgagcttgagaatgtaatttctcaatctaaa gaggaggatatcagttcccatggagatgaaaacgattctctaaatgatgctgcaagcatc attgaggagttagttctacaaggggaaagtatgagggatagtacaacgcctctgaaaaaa taccactctgccttgaagcccctagaattggctgaggaagctgaaaagaagcaggccttc acggctatgcacttggaagagggtgctgctgctcaaccaatgaggcttgatggagttcat aggggttctaatgtcttgggttactttgatgtagatgataacaacactattactcaaacc ctgttatctcaagctttcaggcgagaacatggatcttcccaggtcttggctgttcacctc aactacattgctgtgggaatgtccagaggatcgattcttgtgatgccaagcagatactct ccacatcatgctgatgacatggatgctaagatgttggtttttgggttgccgagagataga cctcaagtccctgtaacttccttgagctttaatcagcaaggggacttgctctttgcagga tatggtgatgggcattatactgtatgggatgtgcaaagggcctctgtgcttaaagttgtc actgaacataaagctccagtggtgcaccttttatatttagggcaggattctcaagttact cgtcagtttaatgtgctcagcggtgatactaaaggtgtagttaagttaagccggtttaaa gtgcttcccttgatcaatatgatctccctttcgaagtcacaggaaatactaacggaaaac aatagcaccacaatatgtgctgtaccactactatctggtgaaagttatggaggtgcaatg gtggcttctctagatggaggcaacccttctttgattgaggaaggtgtggtcatatttggc acacaccaatatgctcttgtggcaaaaataagccccacatttaaagtttatgctaaaatt gcacgctctgatggtgctagggagggttcaatgccatatgctgcttggaaaaaatcagaa agtatgtccattgaaacatcagaaaatgtttcactgcttgcaattgcttgggatcgaaga gttcaggtggctaagctggtgaaatcagagctaaaagtttgttggaaatggactacagat agctcagcagttgggctggcatggttggatgaacagattttggtaattctcacggcaact ggacgactttgtttgttttcaaaagatgggaatttgatccaccagagaagttttgctatg gatggatcttgtggagatgatctcatgtcataccatgcctacttcagcaatgcttttgga aaccctgagaaagcgcatcacaattgtttaggtatcaggggggcaactttgtacattctg cggccatcccagcttgttgtttcacgccttctttcctggaaggaacgaatagaggttttg cataaaggaggtgactggacgagtgcgctgaacatggcaatgtctctttatgatggtcga gcacaagcagttattgaccttccaagtaatttggatgatgttcagaagactcttatacca tatcttgtacagttgctgttgtcatatgtagatgaggtattctcctacatagcagtggca tctggcaaccaacatggacagtcaggccaatcaaatgaatctaagtatgatgctaacttt gtgcatcctgatattaaggagcagtacactgtggttggtggtgtttccgttgaattctgt cttcatatcaagagacttgatgttctatttgatgaaatttttccgaagtttgacgctgtg aatcacaaggatacttttttggagcttctggagccatatattttgaaagacatgctagga tctttaccacctgagataatgcaagcactagtggagcactacagcactaaaggttggtta cagcgtgttgaacagtgtgtcctccacatggacatgttgtccctggatttcaatcaggtt gttcgcctatgcagggagcatatgctgcatggtgcattgatctacttgttcaataaaggt cttgatgattttaggactcccttggaagagctcttttttattttgcgggatagcaaaaga gaaagtgctactgctcttgggtataagatgctcgtttacctcaagtactgcttccaaggt cttgcttttcctccagggcgtggaactctccctcccacacgtgtgccgtctcttaaaaga gagcttgtgcaatttttgttggaggaagcgagttctccaaattcttctacagcaatgtgc ttaccatacagtgtaccgcacccaaacctgctctctctgttagagctcgacacagaggcc accttagatgttttccgatatgcatttgtagaaggtggaaacgaaagtttcagtcctgca tggaatccagctaatttaaagacggaaacaactgaaatagacattttagctatcgaaggc gaaaacttagttcagaaagtagtagatgttcttgctgccattcttgatatgagttatttc caaactggtggttcttttaacagtaaagatgaaagatgtaccgacatttggcctacaaaa aaagatattgagtacatattagattttatttccttttttattacctttgaaaaagctacg gtttcaaaagatacccttcgtcaaattcttgagtacctgacactggggaacgaaacttac cccaatgtgtctgggcggattgttgaaaccttcaacagaagacagaagcaactgactgca ctgttagaagttttgccagaggaagactgggatgcacattacttactgaatttatgtgag aggggtcaactgcatcaggtctgcggcttaattcatgccatccgacatcagtatctttct gctttggacagttatatgaaagctgttgatgagcctattcttgctttcgtatttattgat ggcatgttgcggcaaacgagaggcaaagaatctgatgcttttagatcagcagtcatttct cgaatcccagatctactcaagttgaacagggaaggaaccttttttctgattgtcaatcat ttaggagaggagaaggattacattttgtctcagctgcggtctaatccggaaagtcttttc ctttatctgaaggcgctcattgaagttcattcaacaggcaccctaaacttctcttctcta agaaaagataatgcttcagactttcgtggaagcaagaaacttatgtcgtctgaagtctac ctggaaagcttgtctgacttacctaagctcctgcagaattatccaattcacataactgat gaaatgacagagctttatattgagctgttatgtaggtatgagcctaagtcagtccttgga tttttggagacttttgaaagctatagggtggaacgctgcttgcgtttgtgccaggagtat ggaattgtagatgcagctgctttcttgttagaaagggttggtgacattggaagtgccctt ttgcttgttatatctacacttaatgaaaaattcatcctgcttgatactgctgttgaaagt aaacactgtgatgcagctcccgagcatttcaaagctattttaagcaagaaagaggtcact gacatactagatattttgcgcacttgtattggactgtgccagagaaacagcccccgattg gaccctgatgaagcagaaagtctctggtttcaattgcttgattctttttgtgagcctttg atggattcacatgatcatagtaaaataaggtacaaagaagaagaatgcatgcaagaaggt cagcaggcttgcaaaattcagtggaaggtatcaaaatctcatataaatgctcacatcctc aggaaattgctttctgtgtttatcaaagagattgtcgaaggaatgattggatatgtaagc ctcccaaggatcattctaaagcttctttcagataatgagacacaggaatttggtgatttc aaacctactatactggggatgcttggaacatatgattttgagaggcggattttggacact gctaaatcattgattgaagatgatacttattcctccttgagcttacttaagagaggagct tctcatggatttgcaccgcggagcctcctatgttgcatttgtaactgtcccctcacaaaa gatttctcagcttctagcattcaaattttcagttgtggtcatgcagtacatctccaatgc gaaactcagggaaatgaagcttcatgcaggggcaactcagctggatgtcctatttgtatg ccaagaaagaattcagagaggttgagaagtaaatctgtgcttgtggagaatggattggtg aagactctatcaaaatcccatcaaacacatgggatgactgctcttcatccccatgagaat gatggtatcgacaacttctatggactccagtccatttcaaggtttgacctcctgcttaat cttcaaaagaaccatcagtcaatgcaaatagagaatattcctcagttgaggcttgcacca cctgctgtgtaccatgaaaaggttaagaaaagaaatgttccctcagctggagaaagcagc aatggtctgccaaaaatggagaaacccagcaggagcaagcatctcagagatgtaaaactt aaaggatcatctttaaggttccccctaaaatcaaacatatttggaaaagagaagaacatt aagctgtga

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