Nicotiana sylvestris (wood tobacco): 104220088
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Entry
104220088 CDS
T05026
Name
(RefSeq) protein argonaute 16
KO
K11593
eukaryotic translation initiation factor 2C
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104220088
03036 Chromosome and associated proteins [BR:
nsy03036
]
104220088
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
104220088
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
104220088
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
104220088
microRNA pathway
RISC loading complex
104220088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
104220088
NCBI-ProteinID:
XP_009769203
UniProt:
A0A1U7VS63
LinkDB
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Position
7:complement(22522607..22532533)
Genome browser
AA seq
903 aa
AA seq
DB search
MEGSEGRESFCPPVAVAPPVIALDAEPERVDQPKRTVMSRPGNGTSGRGITLLANHLKVS
VKCPDEIFYQYSVSITCDEKRDVNIKRIGRKIIDKIHETYSSEFAGKKFVYDGEKSLYTV
GPLPRNKVEFTVVVEESSAKHASESPSDNGSNNHSSKRSKRSLHSKAFRVEINFAAKIPL
KSISLALQGADAENVQDALRVLDIILRQQAANRGCLLVRQSFFHDDSRNFTDVGGGVMGC
KGLHSSFRPTLDGLTLNMDVSTTMILSPGPVIDFLLANQNVKEPRYIDWARAKRMLKNLR
VKAKHSNKEFKIIGLSERPCNQQLFSMKVKNGDGLDNGGETIEITVYEYFTKHRNIELSN
SAYMPCLDVGKPKRPNYLPLELCYLVSLQRYTKVLSSVQRASLVEKSRQKPRERIKVITD
AVRDYSYDDDPLLATCGVSIEKQLIQINGRVLEAPKLKAGNGEEVVPRNGRWNFNNKHLL
TPARIERWAVVNFSARCDTSHLSRELISCGRTKGIHFERPHTLIEEDPQNRRAGPVIRVE
KMFEEIIARLPGPPDFLLCVLPERKNSEIYGPWKKKSLTDLGIVTQCISPLKINDQYLTN
VLLKINAKLGGTNSLLAMEHASHLPHIQETPTMILGMDVSHGSPGQSDIPSIAAVVGSLY
WPLISKYRAVVRSQSPKLEIIESLYKPLPNGDDEGIMGELLLDFYRTCNGHKPAQIIVFR
DGVSESQFSQVLNLELDQMIKAYKHLGEGDIPKFTLIVAQKNHHTKLFQASAPENVPPGT
VVDTNIVHPRNNDFFMCAHAGMIGTTRPAHYHVLLDEIGFSPDVLQNLIHSLSYVYQRST
TATSIVAPVRYAHLAAQQFAQFVKFEDLSETSSGHGSVKSIGSTSVTELPRLHMNVSDSM
FFC
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaagtgagggaagagagagtttttgcccacctgtggcagtagcaccaccagtt
atagcgttggacgcggagccagagagagttgatcagcccaagcgtactgtaatgtcgagg
cctgggaatggaacatctggacgagggattactttgctcgcaaaccacttaaaagtttct
gtcaaatgtcctgatgaaatattttaccaatacagtgtctctataacttgtgatgaaaag
agggatgttaacatcaagcggattggaagaaaaatcatagataaaattcatgaaacatac
tcatctgaatttgcgggaaagaaatttgtttacgatggagagaagagtttgtacacagtg
ggacctctgccacgcaacaaagtggaattcacggtggttgttgaagagtctagtgcaaag
catgctagtgagagcccctcagataatggaagcaacaatcactctagtaaaagatctaag
cgttctcttcattcaaaagctttccgggtggagatcaactttgcagctaaaataccatta
aagtccatttctcttgcccttcaaggagctgatgcggaaaatgttcaagatgcattgagg
gttctggacattatattgcgacaacaagctgctaatagaggatgcctcttggttagacag
tcattttttcatgacgactcaaggaacttcacagatgttggagggggtgtaatgggttgt
aaggggctccattccagctttcgtccaacccttgatggattgaccttgaacatggatgtg
tctacaactatgatcctatcacctggacctgtaatcgactttttactcgctaaccagaat
gtaaaggagcctcgttatattgattgggcaagagcaaaaagaatgttgaagaatctgaga
gttaaagctaagcacagcaacaaggaattcaaaatcatcggtctgagtgagagaccttgc
aatcaacagttattttctatgaaagtaaaaaatggtgatggcctagataatggaggagag
accatagagataactgtttatgagtacttcactaaacaccgtaacatagaactttcaaac
tctgcttatatgccatgcctggatgtcggaaaaccgaaacgaccaaactatctgccactg
gagctgtgttatttggtctcccttcaaagatacacaaaagtgttatcatcagtgcagcgg
gcatctttagttgaaaaatcaaggcagaagcctcgagaacgaattaaagttataacagat
gctgtcagggactacagctatgatgatgatccccttcttgccacttgtggagtctcgata
gaaaagcagctcattcaaattaacggcagggtccttgaggctccaaagttgaaggctggt
aatggcgaagaggtcgttccccgcaacggccgatggaattttaataacaagcatcttttg
acccctgcacgaattgaacgctgggcagtggtcaacttctctgcccgttgtgatacaagt
cacctttcgagggagcttattagttgtggaaggaccaaaggcattcattttgaacgccca
catacactcattgaggaagatccccagaataggcgagctgggcctgtaattcgagtagaa
aagatgttcgaagagataatagctagacttcctggccctcctgactttcttctctgtgtc
ttgccagagcgaaaaaactcagagatatatggaccttggaagaaaaaaagcttgactgac
ttgggaattgttactcaatgtatctctccgttaaagatcaatgatcaatatctaacgaat
gtgcttctcaaaattaatgcaaagcttggagggaccaattcattgttggctatggaacat
gcatctcatctgccgcatattcaggaaactccaacaatgattctgggcatggatgtctct
catggatctcctggtcaatcagatattccatcaattgctgcggttgtgggatccttatat
tggccattaatatccaagtacagggcagttgtccgtagtcaatctccaaagttagaaatt
atagaatccttatacaagcctttaccaaatggagacgatgaaggaatcatgggagaactt
cttctggacttctataggacatgtaacggccataaaccagctcaaattattgtcttcagg
gatggcgtcagtgaatcacagttcagtcaagttctgaaccttgagctagatcaaatgatc
aaggcatacaagcatcttggtgagggagacatccccaagttcaccttgattgtggcacaa
aaaaatcaccatacgaaactgtttcaagctagtgcacctgaaaatgttccaccaggtact
gttgtagacacaaacattgtgcatccaagaaataatgactttttcatgtgtgcacatgcg
ggaatgataggaacaactagacctgcacattatcatgtattgctcgatgagattggtttc
tcacctgatgtcctgcaaaatctcatacattcactatcatatgtgtatcaaaggagcacg
actgcgacctctattgtggctcctgtccgttatgcacatctagcagcacaacaatttgca
cagtttgtgaagttcgaagatctctccgaaacttcttcaggacacggcagcgtcaaatca
attgggagcacctcggttactgaactgcccaggttgcacatgaatgtcagtgactcaatg
tttttctgttga
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