Nicotiana sylvestris (wood tobacco): 104220320
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Entry
104220320 CDS
T05026
Name
(RefSeq) amino acid transporter AVT1C-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104220320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nsy02000
]
104220320
Transporters [BR:
nsy02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
104220320
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GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
104220320
NCBI-ProteinID:
XP_009769464
UniProt:
A0A1U7W5C6
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Position
3:11928367..11933127
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AA seq
556 aa
AA seq
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MRNSISEQSFYIESEEEDDEQEKNLGKDENEEEGNESDFSNYSNENDDDNNRQQSKPNSL
ASAWPQSYRQSMDMFSNVPSPSLNFLGTPSLSRLGSSFLGSSLIRRHTPEILPSLQKPLI
PSAEEEKAPHRRSSHGLLPPIHPRKSSMKKIPEPSKDAHGITMSRQSSYGQAVVNGMNVL
CGVGILSTPYAMKEGGWSGLSILFIFGVLSFYTGILLRSCLDSQPGLETYPDIGQAAFGT
PGRIFISIILYVELYFSCIEYIILEGDNLSAIFPNAHLSLGGFELDARHLFVLIATLAVL
PTVWLRDLSVLSYISVGGVVASVLVVLCLYWAGLVDHVGFESKGTVLNLSTLPVAIGLYG
FCYSGHAVFPNIYTSLADRSQFPAVLLTCFGMVTLLYGGTAVMGYLMFGDSADSQFTLNL
PKGLIASKVAVWTTVVNPFTKYALTLSPVAMSLEELLPSKHAKSHVYPILIRTALAFSTL
VVGLSIPFFGLVMALIGSLLTMLVTLILPCVCFLRILKGKTSRLQVSVCVLIIIVGTLSA
VIGSYSAVSNIIQSLS
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgaggaattctatatcagaacagagtttttacatagagagtgaggaagaggatgatgaa
caggagaagaatttgggaaaagatgagaatgaagaagaagggaatgaatctgatttttcc
aattactcgaatgaaaatgatgacgataataatcgccagcagagcaaacctaattcctta
gcctctgcttggcctcagagttacaggcaatctatggatatgttcagtaatgtaccatct
ccaagtcttaactttttgggaacgccttcgttatctcgtctagggagctcattcttgggc
tcatcactcataagaaggcacactcctgagatattgccctctcttcagaagcctctgata
ccgtcagcagaagaagaaaaagcacctcaccgacgtagttctcatggtttgctgcctccc
atacaccccagaaagtcttctatgaagaaaattcctgagccctccaaggatgcacatgga
attaccatgtctcgccaaagctcctacggccaagctgtggtaaatggcatgaatgttctc
tgtggagtaggaatcctttctactccttatgctatgaaggaaggtggatggtctggactt
tcaatattattcatttttggtgtgctttctttctatactggcattctcctgagatcctgc
ttggacagccaacctgggctcgaaacgtaccctgacattggtcaggctgcctttggtaca
cccggacgtatttttatatcaataatcttatatgtggaattatacttctcttgtattgaa
tacataatcttggagggtgataacttgtctgctatatttccaaatgcccatttaagtctg
ggtgggtttgagttagatgctcgccatctttttgttttgatagcaaccctggctgttctt
cctactgtttggctgcgcgacctcagcgttctaagttatatctcagttggaggagttgtt
gcttctgttttggtggttctttgcctgtactgggctggcttggtggatcatgtaggcttt
gaaagcaaagggactgtacttaacctatctactcttcctgttgctattggactttatgga
ttttgttactctgggcatgcagtctttcccaatatatatacatccctggcagatcgtagt
caatttcctgctgtcctcttgacctgttttggtatggtgactctgttgtatggtggaaca
gctgtgatgggatacctaatgttcggggactcagctgattcccagtttactctaaatttg
cccaaaggcttaatagcttctaaggttgctgtgtggacaactgtcgttaatcctttcaca
aaatatgctttaaccttgtctcccgtggcaatgagtttggaggaattgttgccgtcaaag
cacgccaaatctcacgtgtatccgatcctcattagaactgcattggcattctccacatta
gtggttggtctttctattcccttttttggtttggtgatggcattgattggatctttactt
acaatgctagtgactctgatactaccttgtgtttgcttcctgagaatcttgaagggaaaa
acaagtcgtcttcaggtttcagtatgtgttcttattatcatagtaggtactctatcagca
gttatcgggtcctattcagctgtctccaatatcatccagagtttgagctga
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