Nicotiana sylvestris (wood tobacco): 104220498
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Entry
104220498 CDS
T05026
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03030
DNA replication
nsy03410
Base excision repair
nsy03420
Nucleotide excision repair
nsy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104220498
03410 Base excision repair
104220498
03420 Nucleotide excision repair
104220498
03430 Mismatch repair
104220498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsy03032
]
104220498
03036 Chromosome and associated proteins [BR:
nsy03036
]
104220498
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104220498
DNA replication proteins [BR:
nsy03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104220498
DNA Replication Termination Factors
ELG1-RFC complex
104220498
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
104220498
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104220498
Check point factors
HRAD17(Rad24)-RFC complex
104220498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
Mg_chelatase
AAA_16
Rad17
Viral_helicase1
RuvB_N
AAA_24
RCF1-5-like_lid
AAA_5
AAA_11
nSTAND3
AAA_19
AAA_assoc_2
AAA_25
AAA_28
DNAX_ATPase_lid
ABC_tran
MeaB
AAA_30
bpMoxR
IstB_IS21
AAA_18
AAA_3
AAA_7
RNA_helicase
NTPase_1
DO-GTPase1
KTI12
SRP54
cobW
Motif
Other DBs
NCBI-GeneID:
104220498
NCBI-ProteinID:
XP_009769681
UniProt:
A0A1U7VXI4
LinkDB
All DBs
Position
8:complement(212540635..212545194)
Genome browser
AA seq
332 aa
AA seq
DB search
MASSSTTTPSGPEIPWVEKFRPTKVSDIVGNEDAVARLQVIARDGNMPNLILAGPPGTGK
TTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVIILDE
ADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFARLSDQEILGRL
MAVVDAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFGFVNQENVFKVCDQPHPLH
VKNMVRNVLEGKFDDACAGLKALYDLGYSPTDIITTLFRIIKNYDMAEYVKLEFMKETGF
AHMRICDGVGSYLQMCGLLAKLSLVRETAKAA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttcttctacgacgacaccgtcaggcccagaaatcccatgggtagagaagttt
cgacccacaaaggtatcggacatcgtaggcaacgaagatgctgtcgccagactccaagtt
attgctcgtgatggcaacatgcccaatcttatcttagccggtcctcctggtactggcaaa
accactagtatattggctcttgctcatgaacttctggggccaaactataaggaggctgtt
ttggagctaaatgcatcagatgatagaggcatcgatgttgtcagaaacaaaatcaagatg
tttgctcagaagaaagttactctaccccccgggcggcacaaagtaattattttggacgag
gctgacagcatgacatctggagctcagcaagcactgaggaggacaatggaaatatactcg
aactccactcgctttgctctcgcctgcaacacttcttctaagattatcgagcctattcaa
agtagatgtgccctggtccgatttgcaagattatctgaccaagagatccttggacgcctt
atggccgtggttgatgcagaaaaggttccttatgtacccgaaggtcttgaggctattata
tttactgctgatggagatatgagacaggcattaaataacttacaagcaacacacagtgga
tttggttttgtcaaccaagagaatgttttcaaggtttgtgaccagccccatccgttgcat
gtgaaaaatatggtccggaatgtccttgaagggaaatttgatgatgcttgcgcgggttta
aaggctctatatgacctgggctattcccccacggatattatcacaaccctcttccgaatt
ataaagaactatgacatggcggaatatgtaaaactggagttcatgaaggaaactggtttt
gcccacatgaggatctgcgatggggttggttcgtatctccagatgtgcggtttgctggct
aaactatcattggttcgagaaacggctaaggctgcataa
DBGET
integrated database retrieval system