KEGG   Nicotiana sylvestris (wood tobacco): 104220498
Entry
104220498         CDS       T05026                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03030  DNA replication
nsy03410  Base excision repair
nsy03420  Nucleotide excision repair
nsy03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104220498
   03410 Base excision repair
    104220498
   03420 Nucleotide excision repair
    104220498
   03430 Mismatch repair
    104220498
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nsy03032]
    104220498
   03036 Chromosome and associated proteins [BR:nsy03036]
    104220498
   03400 DNA repair and recombination proteins [BR:nsy03400]
    104220498
DNA replication proteins [BR:nsy03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104220498
  DNA Replication Termination Factors
   ELG1-RFC complex
    104220498
Chromosome and associated proteins [BR:nsy03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    104220498
DNA repair and recombination proteins [BR:nsy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104220498
  Check point factors
   HRAD17(Rad24)-RFC complex
    104220498
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 Mg_chelatase AAA_16 Rad17 Viral_helicase1 RuvB_N AAA_24 RCF1-5-like_lid AAA_5 AAA_11 nSTAND3 AAA_19 AAA_assoc_2 AAA_25 AAA_28 DNAX_ATPase_lid ABC_tran MeaB AAA_30 bpMoxR IstB_IS21 AAA_18 AAA_3 AAA_7 RNA_helicase NTPase_1 DO-GTPase1 KTI12 SRP54 cobW
Other DBs
NCBI-GeneID: 104220498
NCBI-ProteinID: XP_009769681
UniProt: A0A1U7VXI4
LinkDB
Position
8:complement(212540635..212545194)
AA seq 332 aa
MASSSTTTPSGPEIPWVEKFRPTKVSDIVGNEDAVARLQVIARDGNMPNLILAGPPGTGK
TTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVIILDE
ADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFARLSDQEILGRL
MAVVDAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFGFVNQENVFKVCDQPHPLH
VKNMVRNVLEGKFDDACAGLKALYDLGYSPTDIITTLFRIIKNYDMAEYVKLEFMKETGF
AHMRICDGVGSYLQMCGLLAKLSLVRETAKAA
NT seq 999 nt   +upstreamnt  +downstreamnt
atggcctcttcttctacgacgacaccgtcaggcccagaaatcccatgggtagagaagttt
cgacccacaaaggtatcggacatcgtaggcaacgaagatgctgtcgccagactccaagtt
attgctcgtgatggcaacatgcccaatcttatcttagccggtcctcctggtactggcaaa
accactagtatattggctcttgctcatgaacttctggggccaaactataaggaggctgtt
ttggagctaaatgcatcagatgatagaggcatcgatgttgtcagaaacaaaatcaagatg
tttgctcagaagaaagttactctaccccccgggcggcacaaagtaattattttggacgag
gctgacagcatgacatctggagctcagcaagcactgaggaggacaatggaaatatactcg
aactccactcgctttgctctcgcctgcaacacttcttctaagattatcgagcctattcaa
agtagatgtgccctggtccgatttgcaagattatctgaccaagagatccttggacgcctt
atggccgtggttgatgcagaaaaggttccttatgtacccgaaggtcttgaggctattata
tttactgctgatggagatatgagacaggcattaaataacttacaagcaacacacagtgga
tttggttttgtcaaccaagagaatgttttcaaggtttgtgaccagccccatccgttgcat
gtgaaaaatatggtccggaatgtccttgaagggaaatttgatgatgcttgcgcgggttta
aaggctctatatgacctgggctattcccccacggatattatcacaaccctcttccgaatt
ataaagaactatgacatggcggaatatgtaaaactggagttcatgaaggaaactggtttt
gcccacatgaggatctgcgatggggttggttcgtatctccagatgtgcggtttgctggct
aaactatcattggttcgagaaacggctaaggctgcataa

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