Nicotiana sylvestris (wood tobacco): 104220525
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Entry
104220525 CDS
T05026
Name
(RefSeq) uncharacterized protein isoform X1
KO
K03504
DNA polymerase delta subunit 3
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03030
DNA replication
nsy03410
Base excision repair
nsy03420
Nucleotide excision repair
nsy03430
Mismatch repair
nsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104220525
03410 Base excision repair
104220525
03420 Nucleotide excision repair
104220525
03430 Mismatch repair
104220525
03440 Homologous recombination
104220525
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nsy01009
]
104220525
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsy03032
]
104220525
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104220525
Protein phosphatases and associated proteins [BR:
nsy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104220525
DNA replication proteins [BR:
nsy03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
104220525
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
104220525
MMR (mismatch excision repair)
DNA polymerase delta complex
104220525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
104220525
NCBI-ProteinID:
XP_009769711
UniProt:
A0A1U7VXL4
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All DBs
Position
8:2586818..2594507
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AA seq
514 aa
AA seq
DB search
MADDMETLGILDEIQALVSDKLQVVSYKWLSRNFLVSSDSAKRLLQEFVEKHGNGLEVVY
SLSGWLKTSPSTYHIRLVSTPNLAEAKKELSDDCSVQVYSVQACIPKDPVALWNTEFVQA
EELFRQPLSVDNCLLDNRFCGVSNPFVKRNGGGTIPSTATVPQVKSGALGLRKSNSTAQA
QPEQKKVQVPSPSANVPSSHVVDAKSESRGTSGPGQGSKLAAEKDKVAQLPAAKKAVQSD
KSSAKNGGALANMWGRVSTKPKADSVSAATSDATPNPAGNAAQICTPEGIEDRVSDDDDQ
QVSVRRTSNGEGNRKRRVIFDFSDEEDEFKDAVNLASPDPPKQKFILGSKQSPSTLELEK
QEVKKAKEASTKSHEREREPLPTSESEKSKLSSSEMISEHATLKNATVKDEVADAAPVSP
KRRKILKTQIDERGREVTEVVWEGEDAEAKVDGNTMKKADNKPVNSTGDRPPMAKKSPAL
GSTAPMHQPGKAGNKKAGNKDPKQGNILSFFKKT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgatatggaaaccctaggcatcctcgacgagattcaagctcttgtatcagac
aaacttcaagtggtttcatacaagtggctgagtcgaaattttttggtgtcatcagattct
gcaaagaggttgcttcaggaatttgttgaaaagcatggaaatggtcttgaggtagtctat
agcttgtctggctggttgaaaactagcccctcaacctaccatataagacttgtctctact
cctaacctcgcagaagccaagaaagaattatcggacgattgctcagttcaggtctatagc
gtgcaagcttgcatccctaaggatccagtggccctctggaatactgaatttgtccaggct
gaagagctctttaggcagcccctctcagttgataattgtttgcttgataatagattttgt
ggagtttcaaatcctttcgtcaagcgcaatggtggaggaacaattccaagcactgctact
gttcctcaggtgaaaagtggagcattaggacttcgtaaaagtaactctactgctcaagcg
caacctgagcagaaaaaggttcaggtaccaagtcctagtgccaatgtgccatcttcgcat
gtggttgatgccaaaagtgagagtcgtggcacatcaggtcctggacagggtagtaagctt
gctgcagaaaaagacaaagttgctcaactgccggctgctaagaaggcagttcagtctgac
aaaagttctgctaaaaatggcggggcattggctaatatgtggggtcgtgtatccacaaag
ccaaaagcggacagtgtttcagctgctaccagtgacgccacaccaaatcctgctggtaat
gcggctcaaatatgtactccggaaggaatagaagatagggtcagtgatgatgatgatcaa
caagtcagcgtcaggagaacatcaaatggtgagggaaatagaaagaggagggtaattttt
gatttttcggatgaagaagatgaattcaaggatgccgtcaacctagcatcacctgatcct
ccaaagcagaaatttattttaggatcaaaacaaagtcctagtactctagaactggaaaag
caggaagtcaagaaggcaaaggaggctagcaccaagagtcatgagcgagaaagagaaccc
ttacctaccagcgaatcggagaagtctaagttgtcctcttcagagatgatttcagaacat
gccactcttaagaatgcaactgtaaaggatgaagtggctgatgctgctccagtttcccct
aaaaggagaaaaatattgaagacacaaattgatgaacgtggaagagaagtgaccgaagtt
gtttgggagggtgaagatgcagaagcaaaggttgacggtaatacaatgaagaaagctgac
aacaaaccagttaatagtactggtgacagaccacctatggctaagaagtctcccgcgctg
ggaagtactgcacctatgcatcaaccaggtaaagcaggaaacaagaaagcaggaaataag
gatcctaagcaagggaatattctatcatttttcaagaagacttag
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