Nicotiana sylvestris (wood tobacco): 104220669
Help
Entry
104220669 CDS
T05026
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03013
Nucleocytoplasmic transport
nsy03015
mRNA surveillance pathway
nsy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104220669
09122 Translation
03013 Nucleocytoplasmic transport
104220669
03015 mRNA surveillance pathway
104220669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104220669
03041 Spliceosome [BR:
nsy03041
]
104220669
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
104220669
Spliceosome [BR:
nsy03041
]
Common components
Common spliceosomal components
Cap binding complex
104220669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
Motif
Other DBs
NCBI-GeneID:
104220669
NCBI-ProteinID:
XP_009769868
UniProt:
A0A1U7VU43
LinkDB
All DBs
Position
8:8759109..8782981
Genome browser
AA seq
864 aa
AA seq
DB search
MSSWKSLLLRLGEKCPEYAGNADFKDQIEACYSAVRRELEHSGDDIFPFLLQCAEQLPHK
IPLYGTLVGLLNLENEEFVAKLVENAQINLQDALETGKCNKIRILMRFLTVLMCSKVIQP
SALVVIFECLLSSSATTVDEEKGIPSWQARADFYITCILSCLPWGGAELVEQVPEEIERV
MVGVEAYLSIRKRVSDAGFSVFEDIEETNNAVNEKDFLEDLWSRVQDLSSREWKLDSVPR
PHLSFEAQLVAGKSHDLAPVSCPEQPGPSGVLSGIAFGRQKHEAELKYPQRIRRLNIFPS
NKTEDIQPIDRFVVEEYLLDVLLFLNGCRKECTSYMVGLPVPFRYEYLMAETIFSQLLLL
PQPPFKPTYYTLVIIDLCKALPGAFPAVVAGAVRALFDKIADLDMECRTRLILWFSHHLS
NFQFIWPWEEWAHVLDLPKWAPQRVFVQEVLEREVRLSYWDKIKQSIENTPALEELLPPR
GGPQFKYSEEDGTDPTERALSVELKDMVKGRKSAREMISWVEENVFPAHGFDITLRVVVQ
TLLDIGSKSFTHLITVLERYGQVIAKICTDDDQQVKLISEVSSYWQNSAQMTAISIDRMM
SYRLISNLAIVRWVFSSSNLDRFHVSDSPWEILRNAVSKTYNRISDLRKEISSLERSVVL
AEEAASRARDQLDSAESKLSIMDGEPVLGENPVRIKRLKSYAEKAKEEEVSVRESLEAKE
ALLARAVDEIKVLILSLYKGFLTALAEPLNDAFRDGTLRPSGQADEMNIDLEDSSVMDLD
KDDGGRPKKSYSHPNGSREINGYNLDGKQQWCLSTLGYLKAFTRQYASEIWQNIEKLDAE
VLTEDAHPLFRKAIYCGLRRPLDE
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttggaagagcttgcttttgcgactcggcgagaagtgccctgagtacgccgga
aatgccgacttcaaagaccaaattgaggcatgctatagtgcagttcgccgagaattagag
cattctggagatgatatttttcccttccttctccagtgtgctgagcaattgcctcacaag
attcctctgtatggaacgctggtaggccttttgaatttggaaaatgaggaatttgtcgcg
aaattagtggagaatgctcaaattaatttacaggatgccttggagactggaaagtgcaac
aagatccgtatattgatgaggtttctgactgttttgatgtgcagcaaagttatccaaccg
agtgcattagtggttatttttgaatgtttattatcatcatcagcgactactgtggacgag
gaaaaaggaattccctcttggcaagcacgtgctgacttttatataacttgtattttatca
tgccttccttggggtggagctgaacttgttgagcaagttcctgaggagattgaaagggtt
atggttggagtagaagcctatttaagtattcgaaaacgtgtatccgacgctgggttttct
gtctttgaggatattgaagaaaccaataatgccgtcaatgagaaggatttcttggaggat
ttgtggtctcgagttcaagatctttctagtagagagtggaaacttgatagtgttcccaga
ccgcacctctcttttgaggcacaattagttgctggaaagtctcatgatttggctccagta
agctgccccgagcaaccaggtccttctggagttttatctggaattgccttcggtagacaa
aagcacgaagctgagttaaaatatcctcagaggataaggaggcttaatatatttccgtca
aataaaactgaggatattcaacccattgatcgctttgttgtggaagagtatttgttggat
gtgcttttattcttgaatggatgtcgaaaggaatgcacttcatacatggttgggctgcct
gtaccattcagatatgaatatcttatggctgagacaatattctctcagcttcttctgtta
cctcaaccgccattcaaaccgacatattacacattggttatcatcgatttatgcaaggct
ctgccaggggcctttccagcggttgtagctggggctgtccgtgctctttttgataaaata
gcagatttagacatggaatgccgaacacgtctcatcctttggttctcgcatcatttgtca
aactttcaatttatctggccatgggaagaatgggctcatgttttagatctgccaaaatgg
gccccacagcgtgtgtttgttcaagaggttttggaaagagaagtccgtctttcatattgg
gacaaaatcaagcagagcattgagaacacccctgctttggaggagttacttccaccgaga
ggtggaccacagtttaaatatagtgaagaagatggtaccgatccaactgagcgtgcgctc
tctgtagagctgaaggacatggtgaaaggtcggaaatctgcccgggaaatgatttcctgg
gtagaagaaaatgtttttccagcccatggttttgatatcaccctcagagttgttgttcaa
acgcttcttgacattggatccaaaagctttactcatttgatcactgtcttggagagatat
ggccaagtcatcgcaaagatttgtactgatgatgatcaacaagttaagctgattagtgaa
gtaagttcttactggcaaaacagcgctcaaatgacagctatatccattgaccggatgatg
agttatcggcttatatctaatttggccatagtgagatgggttttctcttcatcgaacctt
gatcgatttcatgtctctgacagtccatgggagatcctcaggaatgctgtcagtaagacg
tataatcggatttctgatctgaggaaagagatttcatcccttgagagaagtgtcgtcttg
gcagaagaagctgcatctagagccagagatcagttagattctgcggagtctaagctgagt
atcatggatggggaacctgttcttggtgaaaaccctgtaagaataaaacggctgaaatca
tatgcggaaaaagcaaaagaggaagaggtgtctgttcgtgaatctttagaagcaaaggaa
gctcttcttgctcgagcagttgatgaaattaaggttttgatcctttcattgtataaaggc
ttcttgactgctttagcggaaccccttaatgatgcattcagagatggaaccttgcggccc
tctggtcaggcagatgagatgaacattgaccttgaagattcttctgtaatggacttggac
aaggatgatggtggaagacctaagaaaagttacagtcatcctaatgggagcagagaaata
aatggctataatcttgatggaaaacagcaatggtgtttatcaactctgggttacctcaag
gccttcacaaggcaatatgcttcggagatatggcagaatattgagaagttggatgctgag
gtactaactgaagatgctcatcctctatttcgaaaagccatatactgtggcctgcgaaga
cctctggatgaatga
DBGET
integrated database retrieval system
