KEGG   Nicotiana sylvestris (wood tobacco): 104221156
Entry
104221156         CDS       T05026                                 
Name
(RefSeq) histone deacetylase 19
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03082  ATP-dependent chromatin remodeling
nsy03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    104221156
   03083 Polycomb repressive complex
    104221156
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nsy03036]
    104221156
Enzymes [BR:nsy01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     104221156
Chromosome and associated proteins [BR:nsy03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     104221156
   HDAC complexes
    Sin3A-HDAC complex
     104221156
    BRAF-HDAC complex
     104221156
    REST complex
     104221156
    SHIP complex
     104221156
    MiDAC complex
     104221156
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     104221156
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    104221156
  Chromatin remodeling factors
   NuRD complex
    104221156
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 104221156
NCBI-ProteinID: XP_070003594
UniProt: A0A1U7VZR4
LinkDB
Position
1:complement(38827542..38835048)
AA seq 498 aa
MDTGGNSLPSGADGKKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMN
VLKPNPARDKDLCRFHADDYVAFLRNITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGHCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGFGKGKYYSLNVPLDDGI
DDESYQSLFKPIMGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGIELEDKMPPHEYYEYFGPDYTLHVAPSNMEN
KNSRQILEDIRSKLLDNLSTLQHAPSVQFQERPPDTELPEADEDQEDADSRWDPDSDTND
EDRKPIPSRVRRENVEPEGKGAEDMKTEERLREVESTFAESTSLKGGNSGSVMIDGGQIK
MEQGSSNKPFDQPADTNS
NT seq 1497 nt   +upstreamnt  +downstreamnt
atggatactggaggaaactccttaccatctggtgcagatggtaagaagagaaaagtgagt
tatttctatgatcctgaagttggcaattactattatggacaaggccacccgatgaagcca
catagaatccgtatgacacatgctcttcttgcccactatggtctattacaacatatgaat
gttctgaagccaaatcccgctagagataaggatctctgccggtttcatgctgatgattat
gttgctttcttgagaaacataacccctgagacacaacaagatcagctgaggcagctgaag
aggttcaatgttggggaagactgtccagtttttgatggtctttattccttctgtcaaacc
tatgctggaggttctgttggtggggcagttaagttaaaccatggacactgtgatattgcc
gtaaactgggctggtggattacatcacgccaagaaatgtgaagcttctggtttctgctat
gtcaacgacattgtgcttgccattttggagctactcaaagtccatgagagagttttgtat
gtggatattgatatccatcacggtgatggtgtggaggaggctttttataccacagatagg
gtcatgacagtttcctttcataaatttggagattactttcccggtacaggggatgtacgt
gatattggatttggaaagggaaaatactactctcttaatgttccactagatgatggaatt
gatgatgagagctatcagtccctctttaagccaataatgggcaaagtgatggaagttttc
aagcctggtgctgtggtcttacagtgcggtgcagattccttatctggggataggctaggc
tgctttaatctctctattaaaggacatgcagaatgtgtcaaatacatgaggtctttcaat
gtgcctctgctgttgcttggtggaggaggctacacaatacgtaatgttgctcgttgctgg
tgttacgaaacaggagttgcattaggtatagagcttgaagataagatgccgccacatgaa
tattatgaatattttggtccagattataccctgcatgttgctccaagtaacatggagaac
aaaaattctcgtcagattttagaagatataagatcaaagctgcttgataatctttcaaca
cttcagcatgccccaagtgtacagttccaggagcgaccaccagataccgaattacctgag
gctgatgaagatcaggaggatgcagattcaagatgggatcctgattctgacacaaatgat
gaagaccgtaagcccattcctagcagagtgaggagggaaaatgttgaacctgaaggaaaa
ggcgcggaagatatgaaaacagaggagcgtctaagagaagtagagtcgacatttgcagaa
tcaacaagcttgaagggtggcaattcaggttctgtaatgatagatggaggacaaattaaa
atggaacaaggaagctctaacaagccttttgatcaaccagctgatactaattcttga

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