Nicotiana sylvestris (wood tobacco): 104221632
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Entry
104221632 CDS
T05026
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nsy01009
]
104221632
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsy03021
]
104221632
Enzymes [BR:
nsy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
104221632
Protein phosphatases and associated proteins [BR:
nsy01009
]
HAD phosphatases
Fcp/Scp phosphatases
104221632
Transcription machinery [BR:
nsy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104221632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
104221632
NCBI-ProteinID:
XP_009771014
UniProt:
A0A1U7W9W1
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All DBs
Position
1:131038786..131047398
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AA seq
664 aa
AA seq
DB search
MANEEVIAVKDAIHKLQLYLLEGIKDENQLFAAGSLLSRRDYQDVVTERSIANMCGYPLC
SNSLPSERPRNGHYRISLKEHKVYDLHETYMYCSTNCAVNSGAFARSLQDERSSTLNTAK
LNEVLKLFVGLHLHSTEDVKESGDLGLSKLKIQEKVDVKGGEVSMEEWMGPSDAIEGYVP
QRERNLKPALLNNIKKSSKNKQAKLQNEKNMILHEMDFSSTIITQDGYSISKLPAPVNAV
SSKKVKEAQTRTSYEVRDVDVSILGKQVDALQLHSGEETEKTDSNNRSYKVDKFNTGEVS
SGPCQHDVKNKSLEVLNMSDAGREYASDDAREKQSLRSSLKSSKYKKMARSVTWADENVD
NGTGKLTESSSEISEKGDQANRESGPTNMEEDDDSYRFESAEACAAALKQAAEAVASGSD
VPDAVSTAGIIILPPPKEVDEAVLKENDEVLDIEPAPLKWPRKPGVPNYDVFESEDSWYD
SPPEGFNLNLSPFSTMFNSLFTWISSSSLSFIYGNDESFNEEYLSVNGSEYPRKIVLSDG
RSTEIKQTLARCLARALPGLVADLRLPVPISVLEQGLVLLIDTMSFVDPLPAFRMKQWQL
IVLLFLDALSICRIPVLTPYMTGRRTLLPKVLDGAQISAAEYEILKDLIIPLGRVPQFSM
QSGG
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgaagaagtcatcgctgttaaagatgctatccacaagctgcaactctatctt
cttgaaggcattaaagatgaaaaccaactctttgctgctgggtctttgctgtctcggaga
gattatcaggatgtagtaactgaacgatcaatagcaaacatgtgtggttatcctctttgc
agcaactctctgccttctgaaaggcctaggaatggacattaccggatatcattgaaggag
cataaagtttatgatcttcatgaaacatacatgtactgttcaacaaactgtgctgtcaac
agtggagcatttgcccgtagcttgcaagacgagagaagctctactttaaatacagcaaaa
cttaatgaagtcttgaagctatttgtgggattgcatttgcattccacagaggatgtgaag
gaaagtggagatctaggattatccaagttgaagattcaggaaaaggtggatgtaaagggt
ggtgaagtttcaatggaagagtggatgggtccatctgacgcgattgaaggctatgttccc
cagagagaacgaaatttgaagccagcactgttgaacaacattaagaaaagttccaagaat
aagcaggccaaactccaaaatgagaaaaacatgatactacatgagatggacttttccagc
actataataactcaagatggttatagcatttcaaagttaccagcacctgtaaatgctgtc
tcaagtaaaaaggttaaagaagcacaaacaagaacaagctatgaagttagggatgttgat
gtttctatattggggaagcaagttgatgccttgcagttgcattctggagaagaaacagaa
aagacagattcgaataatagaagttataaggtcgataaatttaacactggagaagtgtct
tctggtccttgccaacatgatgtcaagaacaaaagtcttgaggtactaaatatgtctgat
gctggaagagaatatgcatcagatgatgcacgtgaaaaacaatcactcagatcttctcta
aaatcctcaaagtacaagaaaatggctcgttcagttacttgggctgatgaaaatgttgat
aatggcactggaaaattaacggagagttcatccgaaatatcagaaaaaggggatcaagct
aatagggaatcaggccctacaaacatggaagaggatgatgattcatatcgatttgaatct
gcagaagcatgtgcagcagcactaaaacaagcagcagaggctgttgcctcaggttctgat
gtccctgatgctgtgtccactgccgggattataatattaccacctccaaaagaagtggat
gaagcagtacttaaggagaacgatgaggtgcttgatatagaaccagctcctttaaaatgg
ccaagaaaaccaggggtgccaaattatgatgtttttgaatcagaggactcttggtatgat
agtccaccagaggggtttaatttgaatctgtcacctttctctacgatgtttaattctctc
ttcacatggatatcatcatcgtccttgtcattcatatatggcaatgatgaaagctttaat
gaggagtatttgtctgtcaatggaagtgaatatcctcgcaaaattgtgttatctgatggc
cggtcaactgagatcaagcagactcttgctaggtgtcttgctcgagcattaccgggattg
gttgctgaccttaggctgcctgtaccaatatcagttttagaacaaggactggttctcttg
atagatacaatgtcttttgtggatccactccctgcattcaggatgaagcagtggcaacta
attgttcttctgtttctggatgctctttccatatgtaggatacctgtactgactccatat
atgacaggcagaaggactttgcttccaaaggtgcttgatggtgctcagataagcgcagca
gaatatgagatcttgaaagatctaatcattccactaggccgagtgcctcagttctcaatg
caaagtggaggctaa
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