Nicotiana sylvestris (wood tobacco): 104221961
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Entry
104221961 CDS
T05026
Name
(RefSeq) uncharacterized protein isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104221961
Enzymes [BR:
nsy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104221961
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
RhgB_N
Motif
Other DBs
NCBI-GeneID:
104221961
NCBI-ProteinID:
XP_009771422
UniProt:
A0A1U7VU69
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Position
5:complement(176137771..176146724)
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AA seq
682 aa
AA seq
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MRKMKKREWSSILGWLIIFLQLFLLAESALTREKINKKNSQLDEQSFPPVQLLRLDDYVV
VNNGIFNITFSIPGGMVTGIQYNGIENLLEDENEDDNRGYWDIVWNKPDKPGIFDKLHAT
DFNVIMADENQVELSFKRTWDSLNNSHLSMNIDKRFIIIRGSSGFYSYGILERLEGWPNI
DVYQGRIVFKLKEELFQYMAISDERQRIMPTAQDREMGQKLDYPEAVLLTNPTNSFIKGE
VDDKYQYSCENKDNRVHGWISPNPRTGFWMITPTDEFRTGGPLKQDLTSHTGPVNLNMFF
STHYAGESLGLKFRDGEPWKKVFGPVFTYLNSLSPDELDTLTLWTDAKEQMFIETENWPY
NFPLSEDFVRSDQRGIVTGRLLVRDSYESDKLITANSAFIGLAAPGDVGSWQMENKGYQF
WTQTDTEGYFLINNVITGNYSLYAWIPGFIGDYMHDAYINVNPGSRTRVETLVYDAPRNG
PTLWEIGIPERTASEFFIPDAQPRLLNQLYVVNNAERFRQYGLWDRYTEIYPDDDLVFTV
GLSNYQTDWFFAHVNRYIYNDDGNKTYVPTTWQVLFDLDDIDQSANYTLQLALASANDAE
LQVQFNDAEPDAPHYTTGLIGKDNAIARHGIHGLYRLYTINVPGSLLVFGTNVMYLKQTR
SERPWRGIMYDYIRLEGPPESY
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaatgaagaagagagaatggagctctattcttggatggttgatcatttttctt
cagctatttttgttggctgaatctgcattaacaagagaaaaaataaataagaaaaacagc
caattagatgagcagtcttttccaccagtacaattgcttagactggatgattatgtggtg
gttaataatggaatattcaacatcactttctctattcctggaggaatggtcactggaata
caatacaatgggattgaaaatttattggaagatgaaaatgaagatgataatagagggtat
tgggatattgtttggaacaagccagataaaccaggaatttttgacaaacttcatgcaaca
gattttaatgttattatggcagatgaaaatcaagtggagctttcatttaaaaggacttgg
gattctttaaataattcacatctttccatgaatattgacaaaaggtttataataataaga
ggaagttctggattttactcttatgggattttagaacgtttggaaggatggccaaatatt
gatgtctaccaaggaagaattgtcttcaagctcaaagaagaattgttccaatatatggcg
atttcagatgaacggcaaaggattatgccaacggcccaagaccgtgaaatgggccaaaaa
cttgattatccagaagctgttcttcttacaaacccaactaattcttttattaaaggagag
gttgatgacaaatatcaatattcttgtgagaacaaggataatcgggttcatgggtggata
agcccaaatccacgaaccggattttggatgatcacaccaaccgatgagttcagaactggt
gggcctctcaaacaagaccttacttctcataccggcccagtaaacctcaatatgtttttt
agtacacattatgctggagagagtttgggactgaaatttagagatggagagccctggaaa
aaggtgtttggccctgtttttacatacctaaactcactttcacctgatgagctagacact
cttacactatggactgatgcaaaagaacaaatgttcatagaaactgaaaattggccatat
aattttcctctttcggaggattttgttcgatctgatcaacggggtattgtaaccggcaga
ttactcgttcgtgacagctatgaaagtgataagcttattactgcaaactcagctttcatt
ggattagctgctccaggagatgttggatcatggcaaatggaaaacaagggttatcagttt
tggactcaaacagataccgagggctatttcttgattaataatgtcatcactggaaattat
agcttgtatgcttggatccctggatttattggagattacatgcatgatgcatacatcaat
gtcaacccaggatcaagaacaagagtagaaactctcgtatacgatgcgccaaggaacggt
ccaacactctgggaaataggaattcctgaaaggactgcttctgaattcttcattcctgat
gcacaaccaagacttctgaaccaattatatgtcgtaaataatgcagaaaggttcaggcaa
tatggattatgggataggtatacagagatataccctgatgatgatttggtttttactgtt
ggattaagcaactatcaaacagattggttctttgctcatgtcaatcgatatatttacaat
gatgatggaaacaagacttatgtaccaactacatggcaagttctatttgatcttgatgat
attgatcaatcagcaaattatacccttcaactagcattagcctcagcaaatgatgctgaa
ctacaagttcaatttaatgatgcagaaccagatgctcctcactatacaacaggattgata
ggcaaagataacgcgatagctagacatgggattcatggattatacaggctatatactata
aatgttcctggttctcttcttgtatttggaaccaatgttatgtatctcaagcaaactaga
agtgaaaggccttggagaggaattatgtatgattatattcgtctcgaaggtcctcctgaa
agttattaa
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