Nicotiana sylvestris (wood tobacco): 104222160
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Entry
104222160 CDS
T05026
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104222160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104222160
Enzymes [BR:
nsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104222160
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
HECT type E3
104222160
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
HEAT_EZ
TFIIA
PDS5
Motif
Other DBs
NCBI-GeneID:
104222160
NCBI-ProteinID:
XP_009771655
UniProt:
A0A1U7WBQ1
LinkDB
All DBs
Position
1:185911609..185925093
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AA seq
1897 aa
AA seq
DB search
METRSRKRAEATSSAPSSSSSAGPTTRAAKRARLSSTAAATSTANSTPAAASASISIRSR
ISTRSQDSSTPMDSTNESSGSGTRTRRGKNPSHGSDKDNNNLDKGKEKEHEVRVRDKNRD
RDRDREAERSLGLNIDSGGGEDDDNDSEGGVGILHQNLTSASSALQGLLRKLGAGLDDLL
PSSAMGSASSSHQSGRLKKILSGLRADGEEGKQVEALTQLCEMLSIGTEDSLSTFSVDSF
VPVLVGLLNHESNPDIMLLAARALTHLVDVLPSSCAAVVHYGAVSCFVARLLTIEYMDLA
EQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALATAANMCKKLPSDAADF
VMEAVPLLTNLLQYHDAKVLEYASICLTRIAESFASYPEKLDELCNHGLVTQAASLISTS
NSGGGQASLSTSTYTGLIRLLSTCASGSPLGTKTLLLLGITGILKDILSGSGLVASVSVS
PALSKPPEQIFEIVNLANELLPPLPQGTISLPTSTNLLIKGSVVKKSSASGSTKQEETNL
STQEVSAREKLLNDQPELLQQFGMDLLPVLIQVYGSSVNSPVRHKCLSVIGKLMYFSSAD
MIQSLNNITNISSFLAGVLAWKDPQVLVPALQVAEILMEKLPGIFSKMFVREGVVHAVDA
LIVSASHGAAPSQPSSAEKDNDCIPGSSRSRRNRRRGNNSNADASSIEDPKSTVPGSGSP
PNSLEIPKTSSNIRMAVSACAKSFKDKYFPSDSGATEVGVTDDLLRLKNLSMKLNSGVDE
QLSKPKGKSKASAPRLGDISASKEETLAELVASMLGELSKGDGVSTFEFIGSGVVASLLN
YFTCGFFSKERISDANLSRLRQQAIRRYKSFIAVALPATVDSGNMVPMTVLVQKLQNALS
SLERFPVVLSHSSRSSTGNARLSSGLSALSQPFKLRLCRAQGDKTLRDYSSNVVLIDPLA
SLAAIEDFLWPRVQRVESGQKAFASVGNSESGTTPAGVGASCPSTSTPASGSRRTRSRSA
VNINDSAKKDPPQEKNGSSSKGKGKAVLKPAQEDGRGPQTRNAARRRAALDKEAEVKPVT
GDSSSEDDELDMSPVEIDDALVIEDDDISDDDEDDHDDVLRDDSLPVCMPDKVHDVKLGD
SSEENPAAQTANDSQTNAGGGSSSRAASAQGSESVEFRSGSSYGSRGAMSFAAAAMAGLA
SANGRGVRGARDRHGRPLFSTSDPPRLVFSAGGKQLNRHLTIYQAIQRQLVLDEDDEERY
GGTDFVSSDGSRLWGDIYTITYQRADSQAERSTKGDGSSTSTKSNKASSSASASADPSLH
RASLLDSILQGELPCDMEKTNPTYNILALLRVLDGLNQLAPRLRVQSVIDDFSEGENLSL
DELSATGVKIPPEEFVNSKLTPKLARQIQDALALCSGSLPSWCYQLTRSCPFLFPFEVRR
QYFYSTAFGLSRALYRLQQQQGADGNGSTNEREVRVGRLQRQKVRVSRNRILDSAAKVME
MYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSHDLQKVGLGMWRTSSSSSEHSVEVGVDE
KLNGEDKELVQAPLGLFPRPWPSAVDTADGNQFTKVIEYFRLLGRVMAKALQDGRLLDLP
MSTSFYKLVLGQELDLYDILSFDAELGKTLQELQALVSRKQYIESMGGLGQDKISDLHFR
GTPVEDLCLDFTLPGYPEYVLKAGDQNVDLSNLEEYVSLVVDATVRTGIGRQMEAFRSGF
NQVFDISALQTFSPTELDYLLCGRRELWKAETLVDHIKFDHGYTAKSPAIVYLLEIMGEF
TPEQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSSASNTASNGNMPSESADDDLPS
VMTCANYLKLPPYSTKEIMYKKLLYAINEGQGSFDLS
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcggagccggaagcgggcggaggccacctcatcagcgccttcttcatcttct
tctgctggtcccaccacccgtgccgctaagcgtgctcgtctctcctccactgccgccgct
acttccaccgccaattcaactcccgccgccgcgtctgcatcgatctcaattcgttctcgc
atctcaactcgttcccaggactcatctacacccatggactccacaaacgaatcttccggg
tcgggtacccgaacccgccgtggtaagaaccccagtcatggttccgataaagataataat
aatttggataaaggcaaggagaaagagcatgaagttagggtcagggataagaacagggat
agggatagggatagggaggctgagaggagtctaggattgaacatagattccggtggtggt
gaggacgatgataatgatagcgaaggcggtgttggtattttgcaccagaatttaacttca
gcaagtagtgcacttcaaggacttcttaggaaactaggtgctggattggatgatttactc
cccagctctgcaatggggtctgcgtcttcgtcccatcagagtggtcggctcaagaagata
ttgtccggtttaagggcggatggtgaggaagggaaacaagtagaagctctgactcagctg
tgtgagatgctttctattggaacggaagattcactgagcacattttccgtcgactcgttc
gtacctgtgcttgttgggctgctgaatcacgagagcaatcctgacattatgcttcttgcg
gcccgggctcttacccacttggttgatgttctaccttcttcttgtgccgctgttgtccat
tatggagccgtatcatgctttgtagctcggctgcttactattgaatacatggacttggct
gagcagtctttgcaagctctaaagaagatatctcaggaacacccgactgcttgcttgagg
gctggtgcgctgatggctgtgctttcttatctcgacttcttttccactggtgttcagaga
gtagcattagcaactgctgctaatatgtgcaagaagcttccctcagatgctgctgacttt
gtcatggaagctgttccgcttttgacaaatctccttcaatatcatgatgcaaaggtatta
gagtatgcttccatctgcttgacccgtattgccgaatcatttgcatcatatcccgagaag
ctagatgaactttgcaatcacggacttgttacccaagccgcatcgctcatctcaaccagt
aactctggaggtggtcaggcttcactcagcacgtcaacctacacaggtttaatccggctt
ctttcgacatgtgccagtggctctccactaggaactaaaactttactgctgcttggtatc
actggaattctcaaggatattctatcaggttctggtcttgtggcctctgtgtctgtttca
cctgccttgagcaaacctccggagcagatttttgagattgtgaacctggcaaatgagctt
cttcctccgctgcctcaagggacgatctctcttcccaccagcactaatttgttgattaaa
ggatctgttgtgaagaaatcttctgctagtggttctaccaaacaggaggagacgaatcta
tctactcaagaggtttcagctcgagaaaaattattgaatgatcaacctgaacttctgcaa
caatttggaatggatctgcttccagtgctgatccaggtatatggatccagtgtcaatagt
ccagttcgccacaagtgtctctcggttattggaaaacttatgtacttcagcagcgcagat
atgattcagtctctaaataacatcactaacatatcaagttttttggctggagtattggcc
tggaaggatccccaagtgctggtgcctgctcttcaagttgcagaaattttaatggaaaaa
cttcctggaattttttccaagatgtttgtgcgagaaggtgttgttcatgctgtagatgct
ctgatagtgtctgcgtcccatggtgccgctccttcccagccatcatctgctgagaaggac
aatgattgtatacctgggtcatctcgctctaggcgtaatcgacgtcgtggcaataattca
aatgcagatgcaagttccattgaggatcctaagagtacagttccggggagtggatcaccg
ccaaactcattggaaattccaaagaccagttctaacattcgcatggcagtcagtgcatgt
gctaaatccttcaaagataaatacttcccttcagattcaggggctactgaagttggcgtt
actgatgatcttctacgattgaagaatctcagtatgaagttgaactctggtgttgatgaa
caattatctaaacctaaaggaaaatcaaaagcttctgctcctcggcttggagatatttct
gccagtaaggaagagaccttggccgaacttgtagcttccatgctgggggagctcagcaaa
ggggatggtgtatcaactttcgaattcattggaagtggagttgttgcatctttgctgaac
tattttacatgtggatttttttccaaggaaagaatctcagatgctaatttgtctaggctt
cgacaacaagcaatcagaagatataagtcttttatcgcagttgcccttcctgctactgtt
gatagtggaaatatggttcctatgactgttttggttcaaaagcttcaaaatgccttatct
tcgttggagcggttccctgtcgtgctgagtcattcttccagatcatctaccggaaatgcg
cgactttcttcaggtttaagtgctttgtcgcaaccattcaagcttcgcctttgcagagct
caaggggacaagaccctccgtgactactcctcgaatgttgtgttgattgatcctttagca
agtttggcggctattgaagactttctttggcctcgagttcagcgagtagagtctggacaa
aaggcctttgcatcagtaggcaactctgagtctgggaccacccctgcaggagttggtgct
tcatgcccatctacatctactccggcttctggatctcggcgtacacgatctaggtcagcg
gttaacataaatgacagtgcaaagaaagacccaccacaggaaaaaaatggaagttcttcc
aagggcaaaggaaaggctgttttgaagccggctcaagaagatggcagagggccccagaca
agaaatgctgctcgaagacgagcagccttggataaagaagcagaggtgaaacccgtgacc
ggggattctagttctgaggatgatgagttggatatgtcacctgttgaaattgatgatgct
ttggtcatcgaggatgacgatatatctgatgatgatgaagatgaccatgatgatgtcttg
agagatgattctcttcctgtttgcatgccggacaaagttcatgatgttaaattgggtgat
tcttcagaggagaatcctgccgcacagacggcaaatgatagccagacaaatgcaggtggt
ggttctagcagcagagctgcttctgctcaaggatctgaatccgttgagttcaggagtggg
agttcttatggttcaaggggtgcaatgtcatttgctgctgctgccatggccggacttgca
tctgctaatggtagaggtgtgagaggggctagagatcgccatggacgccctctctttagc
actagtgatccacccagacttgtattttctgcaggtggaaagcagcttaataggcacttg
actatctaccaggctatccagcgacagcttgtccttgatgaggatgatgaagagagatat
ggtggcactgactttgtatctagtgacggaagcagactttggggtgatatttacactatc
acataccaaagggctgacagtcaagcagagaggtctaccaaaggtgatgggagctcaact
tccaccaagtcgaacaaagctagttcttcagcaagtgccagtgctgatccctcattgcat
cgagcatcattgttagatagtatattacagggagaacttccttgtgatatggaaaaaacc
aatcctacttacaacattttggccctgttacgtgtactggatggattaaaccagctggcc
ccacggttacgggtccagtcagttattgatgatttctctgaaggggaaaatttgagttta
gatgagctcagtgctactggtgtcaaaattcctccggaggaatttgtcaacagtaagctc
actccaaagttggctcgacagattcaggatgctctagccctttgtagtgggtctcttcca
tcgtggtgttaccagttgacaaggtcctgtccatttctttttccatttgaggttcgacgc
cagtacttctattcaacagccttcggattatctagggctttataccggcttcagcaacaa
caaggtgcggatggtaatggatctaccaatgagagagaagttagggtcgggagattacag
cgccagaaagtccgtgtctctagaaatcgcattcttgattctgctgcgaaagtaatggag
atgtactccagccaaaaagctgttcttgaggttgaatattttggtgaagttggcactggt
ttgggtccaactctggagttctatacccttttaagtcatgatctgcaaaaagttggactg
ggaatgtggaggactagttcctcatcaagtgaacattcagtggaagtgggcgtggatgaa
aaattgaacggggaagataaagaacttgtccaagcacctcttggattattcccacggccc
tggccatcggctgttgataccgctgatggaaaccaattcaccaaggtaatagaatatttc
agattgcttgggcgtgtgatggccaaagcacttcaagatgggcggcttttggacctccct
atgtcaacatcattctataaacttgtcctcggccaagagcttgatctgtatgatattctc
tcttttgatgctgagttgggaaagactttgcaagagttgcaagctcttgttagtcggaaa
caatatatagaatcaatgggaggcctgggccaagacaaaattagtgatttgcattttcgt
gggactccagttgaggatctttgtttagatttcacactcccaggctatcctgaatatgtt
ctgaaagcaggcgatcagaatgtggatcttagtaacttggaggaatacgtttctttggtg
gttgatgccactgtgaggactggaattgggcggcagatggaagcatttagatctggcttc
aatcaagtatttgacatttcagctttgcaaacattctctcctactgagttggactacctg
ctttgtggccgtagagagttatggaaggctgagacgcttgtagatcatatcaaatttgat
catggatatacagccaagagtcccgctattgtttatttactagagatcatgggagagttc
actcctgagcagcaacgagcgttctgtcagtttgtcactggtgctccccggcttcctcca
ggtggtctggctgtgctcaatcctaagctgacaatcgtgaggaagcattcatctagtgct
agtaatacagcatcaaatggtaatatgccatcagaatctgcagacgatgacctacctagt
gtgatgacatgtgctaactacctgaaactgcctccctattctactaaggaaatcatgtac
aaaaagttactctatgctatcaatgaaggccaaggatcttttgatttatcataa
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integrated database retrieval system
