KEGG   Nicotiana sylvestris (wood tobacco): 104222373
Entry
104222373         CDS       T05026                                 
Name
(RefSeq) F-box protein SKP2A
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104222373
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nsy04121]
    104222373
Ubiquitin system [BR:nsy04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     104222373
SSDB
Motif
Pfam: DUF7885 LRR_6 LRR_4 LRR_At5g56370 F-box F-box-like LRR_Zer-1 LRR_8 LRR_13
Other DBs
NCBI-GeneID: 104222373
NCBI-ProteinID: XP_009771905
UniProt: A0A1U7WCF9
LinkDB
Position
4:complement(95229172..95232706)
AA seq 367 aa
MMIGLGVEELSFEKLMVNNNSSGGGCKMGGGGVIREWKDIPMELLLRIVALVDDQTVIVA
SGVCSGWRDAISWGLTHLSLSWCKRNMNNLVLTLAPKFTKLQVLTLRQDLPQLQDNGVET
IANHCHELQDLDLSKSFKLTDCSLYALAHGCPNLTKLNVSGCSAFSDGAVAYLAERCRKL
RVLNLCGCVKAATDKALKAIGYYCTRLQTVNLGWCDKVGDEGVMSLAYGCPDLRALDLCG
CVLITDESVIALANNCPHLRSLGLYFCQNITDRAMYSLAQSRVKNKHEIWASMKKNRYED
EGLMNLNISQCTALTPPAVQAVCEAFPALHTCPGRHSLIISGCLNLTSVHCACSVQAHRA
RVLHPAH
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgatgataggattaggggtggaggagttgagctttgagaagctgatggtgaacaataat
agcagcggtgggggttgtaaaatggggggtgggggtgtgatcagggagtggaaagatata
cctatggagttgttgttgaggatagttgcacttgtggatgatcagacggtgattgttgct
tctggtgtttgcagtggatggagagatgctatttcttggggcctcactcacctttccctt
tcttggtgcaagaggaacatgaacaatttagtgctgacacttgcacccaagttcacgaag
ctgcaggttctaactcttcggcaagatttaccacaacttcaggataatggtgttgagaca
attgcaaatcactgtcatgaacttcaagaccttgatcttagcaagagttttaagctaact
gactgttcactctatgctttagctcatggctgtccaaacctcacgaagctgaatgtcagt
gggtgctcggctttcagtgacggtgcagtcgcatacctcgctgagcgttgcagaaaacta
agagtcttgaatctttgtggctgtgttaaagctgcaactgataaggcattgaaggctatt
ggttattactgtacgcgactgcagactgtgaatctaggttggtgtgataaagttggtgat
gaaggcgtaatgagcttagcttatggctgtcctgatctcagagcccttgatctgtgtggc
tgtgttcttataacagatgagagtgtgattgcgttggcaaacaattgccctcacctaaga
tcgctcggcctatacttctgccagaacatcacagacagagcaatgtactctttggcccag
agtcgggtcaagaacaagcacgagatttgggcgtctatgaagaagaacaggtacgaggac
gaagggcttatgaatctaaacatcagccagtgcactgctctcacgcctcccgccgtccag
gcagtgtgcgaagcattccctgccctgcacacttgccccgggagacattccctcataatt
agcggctgcttgaacttaacatcggtgcactgtgcatgttctgtccaagcacaccgtgca
cgcgttctccatccagctcactga

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