Nicotiana sylvestris (wood tobacco): 104222373
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Entry
104222373 CDS
T05026
Name
(RefSeq) F-box protein SKP2A
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104222373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104222373
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104222373
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GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box
F-box-like
LRR_Zer-1
LRR_8
LRR_13
Motif
Other DBs
NCBI-GeneID:
104222373
NCBI-ProteinID:
XP_009771905
UniProt:
A0A1U7WCF9
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Position
4:complement(95229172..95232706)
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AA seq
367 aa
AA seq
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MMIGLGVEELSFEKLMVNNNSSGGGCKMGGGGVIREWKDIPMELLLRIVALVDDQTVIVA
SGVCSGWRDAISWGLTHLSLSWCKRNMNNLVLTLAPKFTKLQVLTLRQDLPQLQDNGVET
IANHCHELQDLDLSKSFKLTDCSLYALAHGCPNLTKLNVSGCSAFSDGAVAYLAERCRKL
RVLNLCGCVKAATDKALKAIGYYCTRLQTVNLGWCDKVGDEGVMSLAYGCPDLRALDLCG
CVLITDESVIALANNCPHLRSLGLYFCQNITDRAMYSLAQSRVKNKHEIWASMKKNRYED
EGLMNLNISQCTALTPPAVQAVCEAFPALHTCPGRHSLIISGCLNLTSVHCACSVQAHRA
RVLHPAH
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgatgataggattaggggtggaggagttgagctttgagaagctgatggtgaacaataat
agcagcggtgggggttgtaaaatggggggtgggggtgtgatcagggagtggaaagatata
cctatggagttgttgttgaggatagttgcacttgtggatgatcagacggtgattgttgct
tctggtgtttgcagtggatggagagatgctatttcttggggcctcactcacctttccctt
tcttggtgcaagaggaacatgaacaatttagtgctgacacttgcacccaagttcacgaag
ctgcaggttctaactcttcggcaagatttaccacaacttcaggataatggtgttgagaca
attgcaaatcactgtcatgaacttcaagaccttgatcttagcaagagttttaagctaact
gactgttcactctatgctttagctcatggctgtccaaacctcacgaagctgaatgtcagt
gggtgctcggctttcagtgacggtgcagtcgcatacctcgctgagcgttgcagaaaacta
agagtcttgaatctttgtggctgtgttaaagctgcaactgataaggcattgaaggctatt
ggttattactgtacgcgactgcagactgtgaatctaggttggtgtgataaagttggtgat
gaaggcgtaatgagcttagcttatggctgtcctgatctcagagcccttgatctgtgtggc
tgtgttcttataacagatgagagtgtgattgcgttggcaaacaattgccctcacctaaga
tcgctcggcctatacttctgccagaacatcacagacagagcaatgtactctttggcccag
agtcgggtcaagaacaagcacgagatttgggcgtctatgaagaagaacaggtacgaggac
gaagggcttatgaatctaaacatcagccagtgcactgctctcacgcctcccgccgtccag
gcagtgtgcgaagcattccctgccctgcacacttgccccgggagacattccctcataatt
agcggctgcttgaacttaacatcggtgcactgtgcatgttctgtccaagcacaccgtgca
cgcgttctccatccagctcactga
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