Nicotiana sylvestris (wood tobacco): 104222413
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Entry
104222413 CDS
T05026
Name
(RefSeq) uncharacterized protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104222413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104222413
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104222413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
Zn_ribbon_RanBP
GTP_EFTU_D2
MMR_HSR1
Vps36-NZF-N
DZR
GTP_EFTU_D4
G-alpha
Pex19
Motif
Other DBs
NCBI-GeneID:
104222413
NCBI-ProteinID:
XP_070016137
LinkDB
All DBs
Position
10:19786235..19801629
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AA seq
666 aa
AA seq
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MIEGISESVTMPRKVNYGVDYEQDFYDYEDYNYDYDDGYDSAEKNGRVPRTNTKQEFVKA
GIWCCSICTFDNKDTVNVCDVCGNTKQEPVKAGVWRCPICTFDNEDTMNACDICGVLRNP
LIKSCGGSKASAATLDKVLQSNVPSSKKELATEVKEELVAEGPASSSAPTAKFRRDVMKD
RGSPKETRENHGVTSNMRNMSMSSIPCIAETGSAASRSQSKSQKIVRPDQLEDRLDQLNL
AIVGHVDSGKSTLSGRLLHLLGQISQKEMHKYEKEAKQQGKGSFAYAWALDESAEERERG
ITMTVAVAYFKTKSYRVVLLDSPGHRDFVPNMISGATQADAAILVIDASIGAFEAGIDVT
GGQTREHALLIKSFGVDQIIIAINKMDAVGYSKERFDTIKNQLGSFLRSCKFKDSSVLWI
PLSAMENQNLVTSPSDARLLSWFQGSCLLDAIDSLQPPQRDYSKPLVMPICDLVKSPSQG
QVSVCGKLETGALQVGDKVLVMPSREVATVRSLEHNSQVCNSTKAGDNVTVNLPGIDANR
VMAGDVLCHPEYPVAVTNHLELKILILDIAVPILIGSQLEFHVHHAKEAARVVRILSLLD
PKTGKETKKSPRCLLAKQNAIIEVVLQGMICVEEHSKCKALGRVSLRASGRTVALGLVTR
VLEKNE
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaggcatatctgaaagcgtcaccatgcctcgtaaggtaaattatggagttgat
tatgagcaagacttttatgactatgaagattacaactatgactatgacgatggatatgat
tctgcagagaaaaatggcagggtaccaagaacgaatacgaaacaggaattcgttaaggct
ggcatctggtgttgttccatttgcacatttgataacaaagatactgtgaatgtgtgtgat
gtttgtggaaatacaaagcaagaaccggttaaggctggggtttggcgttgtcccatttgc
acatttgataatgaagataccatgaatgcatgtgatatttgtggggtccttcgtaaccca
ttgatcaaaagttgtggcggcagcaaagctagtgcagctactcttgacaaagtcttacag
tcaaatgtcccatcaagtaaaaaagaattagctactgaagttaaagaagaactggttgcc
gaagggcctgctagctcttctgcaccaacagcaaaatttagacgtgatgttatgaaggat
agaggttctcctaaagaaactagggaaaatcatggtgtcacgagcaacatgcgcaatatg
tctatgtcatcaattccttgcattgcggagaccggaagtgcagcttcaagatcacagagt
aaatctcagaaaattgtacgccccgaccaattagaagacagattggaccagttaaatctc
gcgattgttggccatgttgattctgggaagtcaacattatcaggaagattattacacctt
ttggggcagatatctcagaaggaaatgcacaaatatgagaaagaggccaagcagcaagga
aaagggtcttttgcttatgcctgggcactggatgagagtgctgaggaaagagagagggga
ataactatgacagtggctgttgcttactttaagacaaaaagttaccgtgttgtactgctt
gattccccaggccatagagactttgtcccaaatatgatatcaggtgcaacacaagcagat
gctgcaattctcgtaattgatgcttcaataggcgcatttgaagcagggattgatgttact
ggaggtcagacaagggagcatgcactacttatcaagagctttggagtggatcaaataata
attgctattaacaaaatggatgcagtgggatactccaaagaacgtttcgatacaattaag
aatcaactaggatcatttcttcgttcttgtaagtttaaagattcatcagtactctggatt
cccctcagtgccatggaaaaccaaaatttggtgacaagtccttctgatgcaagattgttg
tcctggtttcaaggttcttgccttttggatgcaatagactctctccaacctccccaaaga
gattactcaaagcctctagtaatgccgatatgtgatcttgttaaatcaccgtcacaagga
caggtgtcagtatgcgggaagttggagacaggagctcttcaagttggagataaggttcta
gttatgccatcaagagaagtggcaacagtgcgttctttggaacataattctcaggtttgt
aacagtacaaaagctggagacaatgtcactgttaatctaccaggtatagacgcaaatcgt
gtaatggcaggggatgtgctgtgccaccctgaatatcctgttgctgttacaaatcatttg
gaactgaagattcttatcctggatattgccgttccaattttgattggctctcagttggag
tttcatgtacatcatgctaaggaggctgcaagagttgtgaggattttgtcattgcttgat
ccaaagactggaaaggagaccaagaaatcacctcgatgtcttctagcaaagcagaatgct
ataatcgaggtggtcttgcaaggaatgatttgtgttgaagagcattctaaatgtaaggct
cttggaagggtgtccctcagggcatcaggaagaactgttgctcttggtcttgtgactcga
gttctagagaagaacgaatag
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