KEGG   Nicotiana sylvestris (wood tobacco): 104222647
Entry
104222647         CDS       T05026                                 
Name
(RefSeq) uncharacterized protein
  KO
K12875  apoptotic chromatin condensation inducer in the nucleus
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03013  Nucleocytoplasmic transport
nsy03015  mRNA surveillance pathway
nsy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104222647
  09122 Translation
   03013 Nucleocytoplasmic transport
    104222647
   03015 mRNA surveillance pathway
    104222647
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nsy03019]
    104222647
   03041 Spliceosome [BR:nsy03041]
    104222647
Messenger RNA biogenesis [BR:nsy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     104222647
Spliceosome [BR:nsy03041]
 Complex C
  Other components
   EJC/TREX
    104222647
SSDB
Motif
Pfam: RRM_ACIN1 RSB_motif SAP Hexapep_GlmU Pinin_SDK_memA
Other DBs
NCBI-GeneID: 104222647
NCBI-ProteinID: XP_009772194
UniProt: A0A1U7WC08
LinkDB
Position
5:133567378..133572433
AA seq 809 aa
MSSPYPVIDNRPIDQLKVTELREELKRRKLPIKGLKQELVRRLAEAILQEQDAAHTKSEN
GGDSAPGPDEEMAESVDADNPKDNFDADNTTDKEADEKMSEVDAAENRVQLDEGKFLIEE
PVGGAISTMVEKDLVAQIADTETSAPTKEDQIAEVSVVQTSEPVSVSVESATALSGQDLQ
KYETQNGSGDLKEQLEYPISNSLLVEENVSLSILESQVSEISPVLGFQVNSDFVSTDVSI
DEKIELKDNVIANDVEVELDVKPEMVQLFSSSDVTDDAKSHTMDVEEPHDKKMSTEEPGN
KNDKYPEVSVVQTSDPVGVVVESDTALSGQDSQKYETQNESEDIKEQLENHISISSVDEA
KVSSSNLETQVSELSPVLGFQVKSDSVSADVSIDEKIELMDNVIADDVKIELDVKPDNVQ
LSSSSVDPGDGKSQPMDVEEPYDEKVSVEEPGNENDKYVDIMKTDGNGDSAEKLQLDRSP
GDDSTEEDVSEGKLGYFKLDSAKKIDGKKEIEVNTSTGVGSVASLDDARSVAHIDTNVED
NGPVVKSVKRKPHYQGTAAGSNDTVKRQRKWNSEDLKIPENKKGDAVASTTPKDFFQPSF
RRSVFRSDSVAKEEPPKERVVPPSSKVPTNSLLIENFLRPFTLKAVQELLSKTGTVTNFW
MDAIKTHCFVSFASVEEAVETRNAVYNLQWPPHGGKLLVAEFVDPQGVKDKVEAPSQSPS
THATPVTTIPAAAPPSAQPQPSPRQQMQNKQLQSEKLPPPPLPEKLDPPIVTLDDLFRKT
KATPRIYYLPLSDEQVAEKLKAQGKIIKQ
NT seq 2430 nt   +upstreamnt  +downstreamnt
atgtcgtcaccgtatcctgttattgataatcgaccaattgatcagttgaaggtcacagag
ctaagagaagagcttaagagacgtaagctacccataaaggggttgaagcaagagttggta
aggcgattagcagaagcaatcctccaagagcaggatgctgctcatactaagtcagagaat
ggtggtgattccgcgcctgggccagacgaagaaatggctgaatctgttgatgcagataat
cctaaggataattttgatgctgataatacgacagataaggaagcggatgagaaaatgagc
gaggttgatgcagctgaaaacagagtgcaattggatgaagggaaattcttaattgaggag
ccggttggtggtgctatttctactatggttgaaaaggatctggtagcccaaattgcggat
acggaaaccagtgctccaaccaaagaggaccagatagctgaagttagtgttgtgcaaacc
agtgaacctgtcagtgtgagtgttgagtctgccacagctttaagtggacaagacttgcaa
aaatatgaaacccagaatgggagtggggatttaaaagagcagctggagtatcccatttca
aattctttactagtggaggaaaatgtcagtttatccattctggaaagtcaggtatctgag
atcagccctgttttagggttccaagtaaactctgattttgtttccactgatgtctcaatt
gatgaaaaaatagaactgaaggataatgtaatagctaatgatgtcgaagtagaattagat
gttaaacctgagatggtgcagctattctcgagcagtgatgtcactgatgatgcaaaatca
catactatggatgttgaagaaccacatgacaagaaaatgtctacagaagaaccaggcaac
aaaaacgataaatatcctgaagttagtgttgtgcaaaccagtgatcctgttggtgtggtt
gtagaatctgacacggctttaagtggacaagactcgcaaaaatatgaaacccagaatgag
agtgaggatataaaagagcagctggagaatcacatttcaatttcttctgtggatgaggca
aaggtcagttcatccaatctggaaactcaagtatctgagctcagccctgtgttagggttt
caagtaaaatctgattctgtttccgctgatgtctcaattgatgaaaaaatagaactgatg
gataacgtaatcgctgatgatgtcaaaatagaattagatgttaaacctgataacgtgcag
ctatcatcaagcagtgttgaccctggtgatggaaaatcacaacctatggatgttgaagag
ccatatgacgagaaagtatctgtagaagaaccaggcaacgaaaacgataaatatgttgat
ataatgaagactgatggcaatggggattctgcagagaagttgcaattagaccgaagtcct
ggtgatgattccactgaggaggatgtttcagagggtaaattaggttattttaagttggac
tcggcgaaaaaaatagatggaaagaaagaaattgaagtgaacacgagtacgggggtagga
tctgttgcttctctggatgatgctaggtcagttgcccatatagataccaatgttgaagac
aatggtcccgttgtgaagtctgtgaaaagaaaacctcattatcaaggaacagcagcgggg
agcaatgatactgtaaagaggcagcgtaaatggaattcagaagatcttaaaattcctgag
aacaagaaaggtgatgctgtggcctcaactacccccaaggattttttccagccctctttc
agacgtagtgtctttagatctgattcagtggcaaaggaggaaccaccaaaagaacgtgtg
gttcctccatcatcgaaagtgcctactaattctctcttgatcgagaattttctgcggcct
ttcaccttgaaagcggtgcaagagctacttagcaagacgggcacagtgacaaatttctgg
atggacgctattaagacccactgctttgtttcttttgcatctgtagaagaagctgtagaa
actcggaatgctgtatataacctgcaatggcctccacatggaggaaagctacttgttgct
gagtttgttgatccccagggggtgaaagataaggttgaagcaccatctcaatctccctca
actcatgcaactcctgtgaccacaatcccggctgcggccccaccttctgcccagccccaa
ccatcaccaaggcaacagatgcagaacaagcaacttcaatctgagaaacttccaccacct
ccacttcctgagaaactcgaccctccaattgtcactctggatgatctttttagaaagaca
aaggcaacacctcgcatttactatttgcctttgtctgatgagcaagttgcagaaaaattg
aaggcacaagggaagattatcaagcagtag

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