Nicotiana sylvestris (wood tobacco): 104222692
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Entry
104222692 CDS
T05026
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104222692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nsy03009
]
104222692
Ribosome biogenesis [BR:
nsy03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104222692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WDR55
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_NUP159_NUP214
DUF7165
Beta-prop_EIPR1
WD40_like
Beta-prop_TEP1_2nd
Beta-prop_DCAF4
Beta-prop_NOL10_N
NBCH_WD40
Beta-prop_VPS8
Spc24
Motif
Other DBs
NCBI-GeneID:
104222692
NCBI-ProteinID:
XP_009772264
UniProt:
A0A1U7WC81
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Position
3:45596445..45602994
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AA seq
553 aa
AA seq
DB search
MASLISQNASHTIGVEKSKRKAKKEVSEKESNRKRKKEQNEENDELEVEQEKEMKKLENL
LFGSLYNPVGFRKDDEEEKRNDGEYDSAMFFVDRFADSALSVYEGDAQLVPQGIHIVGKE
ERKPVWVDDEEEKTSIKIASVNRSRKLRKEEGEDVISGSTYVARLRAQHAKLNPGTEWAQ
IDSQGRSYSSDDEDSDEESKHTEGYGSKSVKLVGDILQSNEDLVVKSHTKLLPGLLEYSR
LVDANAPDPSNAPINFVQFHRNSQLLLVGGLDKKLRFFQIDGKRNTKIQSIFLEDFPIKK
ASFLPNGSQVIISGRRKFFHVLDLVKASVDKIGPLVGREEKSLESFEVSPDSNTIAFLGN
EGYILLVSSKTKELIGTLKMNGTVRSVAFTNDGQQLLSSGGDGQIYHWDLRTRTCIHKGV
DEGSINGTALCTSPNGSLFAAGSDSGIVNIYNREEFLGGKRKPIKGIENLTTKVDFMKFN
HDAQILAISSSMKKNSSKLIHIPSFTVFSNWPSPNRAVHYPRCLDFSPHGGFMAMGNAEG
KVLLYKLHHYHDA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcttgatatcgcagaatgcttctcataccatcggggttgaaaagtctaaaagg
aaggctaagaaggaagtaagtgagaaagaaagtaataggaagagaaagaaagagcaaaat
gaagagaatgatgaattagaagtcgagcaggagaaggaaatgaagaagcttgagaactta
ttgtttggctccttgtacaaccctgttgggttcaggaaggacgatgaagaagaaaagaga
aatgatggcgaatacgattctgctatgttctttgtggaccggtttgcggatagtgctttg
tctgtttatgagggggatgcacagctggtgccacaaggtatccacattgtgggaaaggag
gagcggaaaccggtgtgggtagatgacgaagaagagaagactagtatcaaaatagcaagt
gtgaacagatcgaggaagctgaggaaagaagagggtgaggatgtcatatctggttccacg
tacgtggcgagactaagggctcaacacgctaaacttaatccaggcactgaatgggcccaa
attgattctcaaggcagaagctacagttctgatgatgaagattctgacgaggaaagtaaa
catactgagggctacggttcaaagagtgtcaagttggttggtgatattcttcaatcaaac
gaagatcttgttgtcaaaagtcacacaaagttgttacctgggcttcttgaatattcgaga
ctggttgatgcaaatgcacctgatccttcaaatgcaccaataaattttgttcagttccac
aggaattctcagttgctccttgttggtgggttggataaaaaactcagattttttcagatt
gacgggaaaagaaatacaaagatacagagcatctttcttgaggattttccaattaaaaag
gcatctttcttacccaatgggtctcaagttattatatcaggaagaagaaagttctttcat
gtcttagacttggtcaaagcaagtgtagataaaataggtcctctagtcggcagggaagaa
aagagcctggaaagttttgaggtttctcctgattcaaatactattgcttttcttggtaat
gaaggatacattttgctagtttcctccaaaacaaaggagctaattgggacactgaaaatg
aatggaactgttcgctcagtggctttcaccaatgacggacaacaattattgagctctggt
ggagacggccagatttaccattgggatttgagaacaagaacttgcattcataaaggtgtt
gatgaagggtccataaatggtacggctctttgcacttcaccaaatggtagtttgtttgct
gctggttcagacagcgggatagtaaatatttataacagagaagagtttttgggcggaaag
agaaaaccaatcaaggggattgagaatctcacaacgaaagtggattttatgaaatttaat
catgatgctcaaatattagccatcagttctagcatgaagaaaaacagctcaaaactaatt
cacattccatcatttacagttttttcaaactggccttctccaaatcgagccgtgcactat
ccgcgctgtttggattttagtcctcatggaggattcatggctatgggaaatgctgaagga
aaagtgttactgtacaagttgcatcactaccatgatgcatag
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