KEGG   Nicotiana sylvestris (wood tobacco): 104223264
Entry
104223264         CDS       T05026                                 
Name
(RefSeq) DNA repair protein RAD5B
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nsy03400]
    104223264
DNA repair and recombination proteins [BR:nsy03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    104223264
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN UBA_RAD5A zf-C3HC4_3 zf-C3HC4 DEAD zf-RING_UBOX zf-C3HC4_2 zf-RING_2 zf-C3HC4_4 RING_XB3-XBAT31 ResIII zf-RING_5 zf-RING_4 Prok-RING_4 GIP1_N CUE zf-ANAPC11 UBA HDA2-3
Other DBs
NCBI-GeneID: 104223264
NCBI-ProteinID: XP_009772967
UniProt: A0A1U7VYX1
LinkDB
Position
9:190193958..190202820
AA seq 1191 aa
MEAKVDEGVLPLDLVESDNEKKVKMIKSIIGSEITEKAILEALSQQNNNPDAAINHLLDS
SPLSAVHKTVTSTGVRISATVKQENVEESVGFGKVHGLNVKEEPDVGIDEKGLKVEEKKV
IDGYESKGSVGKCDTSFNGEEMVNGLKVKEEPDMVISEKGLKVEEKKVIDGYESKGSVGK
WDLSFDEWLKLPENNPGIDTQKPKEEEKKLEIMKVKEEQQDVLCVEPLSARPLSKQEYNS
LKGSNVANGANQEYSRLKSSSNVAISANMEKMGIKKNMLSTIVIEDGDFPEDPDWLLVGR
TIVTGLSTTKGRKLENNEIVHFAFPQQGNSKCSSQWGGSRAAVAAASSIVRFSTKRFGEI
GRLPMEWAKCLIPLVNSSKVKVHGRCVAAPVTLQLMQELMLYVSFYIHQSVFTSGDKSTW
KLDSPSQIDTTTYPLLTLFKLLKVKPFQNAEFTPDELYSRKRQLSLDCDSNEAASASPIA
KRRNGCQQYSEQNKDEHDISEASFNKLVGSVDMYDLKEMDAPDTLMCCLRHYQKEALYWM
SESEKGSDVEETSKTLHPCWAAYRICEERKIYVNIFSGEATTEFPTASKSARGGILADAM
GLGKTVMTIALILAKMGRGGSTDDQECVLEDVDEDERITKRITYADTEVSRKAKGSTLIV
CPMALLGQWKDELEAHSKPGSVSVFVHYGGDRSNDPKVIAEQDVVLTTYGVLSATYKADR
ENSIFHKVDWYRVVLDEAHTIKSWKTLGAQAAFTLSAHCRWCLTGTPLQNNLEDLYSLLC
FLHVEPWCNWAWWNKLIQRPYENGDQRALKLIKAILRPLMLRRTKDTKDKEGRPILVLPP
TDIQVIQCIQSEAERDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPF
LVMSRSDTQEFADLDKLARRFLETNPDSTTQKALTPAYVEEVVEGIRNGENTECPICLES
ADDPVLTPCAHRMCRECLLSSWRTPASGLCPICRQMIRKNELFTCPSENRFRIDVEKNWQ
ESSKVSKLLDCLESIRKSGSGEKSIVFSQWTTFLDLLEIPLKRKKIGYLRFDGKLVQKQR
ERVLKEFSETNEKTILLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQK
NTVRVRRFIVKDTVEERMQQVQARKQRMIAGALTDEEVRSARLEELKMLFR
NT seq 3576 nt   +upstreamnt  +downstreamnt
atggaagcaaaggttgatgaaggggttctgcctcttgacttggtagaatcagataacgag
aagaaagtaaagatgatcaaatcaattatcggttctgaaattacagaaaaggccattctt
gaggcgctttctcaacaaaacaataatccagacgcagccatcaaccacttgctcgattct
tcgccgctgtcagcggttcacaagactgttactagcactggggtgaggatttctgctact
gtaaaacaagaaaatgttgaagaatcagtgggttttggaaaggttcatgggctaaatgtt
aaagaagaacctgatgtgggtattgatgaaaaagggctaaaagtggaagaaaagaaggtt
attgatggttatgaatcaaaagggtctgttggtaaatgtgatacgagctttaatggtgaa
gaaatggttaatgggctaaaagttaaagaagaacctgatatggttattagtgaaaaagga
ctaaaagtggaagaaaagaaggttattgatggttatgaatcaaaagggtctgttggaaaa
tgggatttgagctttgatgaatggttaaagttgcccgaaaacaatccagggatcgataca
cagaagccgaaagaagaagaaaagaaacttgaaatcatgaaagttaaagaagaacaacaa
gatgtactttgtgttgaaccattgtcagcaaggccattatcaaaacaagaatacaattca
ctgaaaggtagtaatgtggctaatggtgcaaatcaagaatacagcagactgaaaagtagt
agtaatgtggctatttctgcaaatatggaaaaaatgggaattaagaaaaatatgcttagt
actattgtgatagaagatggagattttcctgaagatcctgattggttattagttgggaga
actattgttactgggctttcaactacaaaagggagaaaattggaaaataatgaaattgtt
cattttgcttttcctcaacaagggaatagtaagtgtagttcacaatggggtggatcaaga
gctgctgttgctgctgcatcttccattgttcgattctcgacgaaaagatttggggagatt
gggcgtctcccaatggaatgggcaaaatgtctcattccacttgtaaattcttcaaaggta
aaggttcatggccgatgtgttgctgcgcctgtaactctgcagctaatgcaggagcttatg
ttgtatgtaagtttctacattcaccagtcagtgtttactagtggcgataagtcaacttgg
aagctggattctccctcacaaattgatactacaacatatccactacttactttgtttaag
ttactcaaagtcaaaccatttcaaaatgctgagttcactccggatgaactttattctcgt
aaacgccagctcagtttagattgtgattcaaatgaggctgcttcagcatcaccaatagca
aaacgaagaaacggctgccagcagtattcagagcaaaacaaggatgagcatgatatctct
gaagcatcgtttaacaaacttgttggttctgtagacatgtatgacctgaaggaaatggac
gctcccgatacacttatgtgctgcctaaggcattaccagaaggaagctctttactggatg
tcagaatcagagaaaggaagtgatgttgaggaaacatctaaaactcttcatccgtgttgg
gcagcatatcggatatgtgaagagaggaaaatttatgtcaatattttctctggggaagca
acaacagagttcccaactgcatcaaaatcagcgcgaggagggatattggcagatgcgatg
gggctcggaaaaacagtaatgacaattgccttaatacttgcaaaaatgggcaggggtggt
agcactgatgatcaggaatgtgtcttggaagatgtagatgaagatgaacgtataacaaaa
agaatcacttatgctgatacagaagtctcaagaaaggcgaagggcagcactctcattgtc
tgtcctatggcattacttggccagtggaaggatgaacttgaagcacattcaaaacctggt
agtgtttcagttttcgttcattatggtggggacagaagtaatgaccctaaagtgatagca
gaacaagatgtagtcctaacaacttatggtgtcttgagtgcaacttacaaggctgatagg
gagaacagcatatttcataaagttgattggtatcgtgttgttctggacgaggcacacacc
ataaaatcatggaagactctcggtgcacaggccgcctttactttgtcagcgcattgtagg
tggtgtcttactggtactcctcttcagaataatttggaggacctttacagccttttatgt
ttcttgcacgtcgagccatggtgcaactgggcatggtggaacaagttaatacagcgacct
tatgaaaatggtgatcaaagagcactaaaattgatcaaagccattttaaggccacttatg
ttgaggagaacaaaggataccaaggacaaagaaggaaggccaattcttgttcttcctcca
actgatattcaagtcattcagtgtatacaatcagaagcggaacgtgacttctatgatgcc
ctcttcaagagatctaaagttcaattcgatcagtttgtggcacaaggaaaagttcttcac
aactatgctaatattctcgaattactacttcgattgaggcagtgttgcaatcatcctttc
cttgttatgagtcgaagcgatacacaagaatttgcagacttagacaagctagcaagaagg
ttcttggaaacaaatcctgattctacaacacagaaagcacttacaccagcatatgtagaa
gaagttgttgagggaattcgtaacggcgaaaatacagaatgtccaatatgccttgagtca
gcagatgatcctgtgttaacaccatgtgctcacagaatgtgcagagaatgtctactttca
agttggagaacaccagcaagtggactttgtccaatttgtagacaaatgataaggaaaaat
gagctatttacgtgtccatccgaaaatcggtttaggattgatgttgagaaaaattggcaa
gagtcatctaaggtttcaaaactgttggattgtttagaatctataagaaaatcaggttct
ggtgaaaagagcatcgtttttagtcaatggactacatttcttgatcttttggagattcca
ctaaagagaaagaaaattggttatttgaggtttgatggaaaattggtgcaaaaacaaaga
gaaagggtcttgaaagagttcagtgagactaatgagaaaacaattttgttaatgtcacta
aaagctggaggtgtgggcttgaatttaacagcagcttctaatgtcttcctcatggatcca
tggtggaatcctgcagtagaagagcaagcaataatgagaattcatcgtattggtcaaaag
aatacagttcgtgttagaaggttcattgttaaggacacagtagaagaaagaatgcaacaa
gtacaagcaagaaagcaaaggatgatagctggagctttgactgatgaagaagtacgttca
gctagacttgaagaactcaagatgctttttcgataa

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