Nicotiana sylvestris (wood tobacco): 104223339
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Entry
104223339 CDS
T05026
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104223339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104223339
03016 Transfer RNA biogenesis [BR:
nsy03016
]
104223339
03012 Translation factors [BR:
nsy03012
]
104223339
04131 Membrane trafficking [BR:
nsy04131
]
104223339
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nsy04147
]
104223339
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
104223339
Transfer RNA biogenesis [BR:
nsy03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
104223339
Translation factors [BR:
nsy03012
]
Eukaryotic type
Elongation factors
104223339
Membrane trafficking [BR:
nsy04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
104223339
Exosome [BR:
nsy04147
]
Exosomal proteins
Proteins found in most exosomes
104223339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FlpD
AAA_22
SRPRB
Motif
Other DBs
NCBI-GeneID:
104223339
NCBI-ProteinID:
XP_070024489
LinkDB
All DBs
Position
2:197136857..197139542
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKNVDKKDPTGAKVTKAAQKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagagaagtttcacatcaacattgtggtcattggccacgtcgactctggaaag
tcgaccaccactggtcacttgatctacaagcttggtggtattgacaagcgtgttattgag
aggttcgagaaggaagctgctgagatgaacaagaggtcattcaagtatgcctgggtgctt
gacaagcttaaggctgaacgtgagcgtggtatcaccattgatattgccttgtggaagttt
gagaccaccaagtactactgcactgtgattgatgcccccggacacagggactttatcaag
aacatgatcactggtacttcccaggctgattgtgctgttcttattattgactccaccact
ggtggttttgaagctggtatttccaaggatggtcagacccgtgagcatgcattgcttgct
ttcacccttggtgttaagcaaatgatttgctgctgcaacaagatggatgctaccacccca
aagtactcaaaggctaggtatgatgaaattgtgaaggaagtttcttcctacctcaagaag
gtcggttacaaccctgacaagatcccctttgtccccatctctggtttcgagggagacaat
atgattgagaggtctaccaaccttgactggtacaagggccctaccctccttgaggctctt
gaccagattaatgagcccaagaggccctcagacaaacccctccgtcttccacttcaggat
gtttacaagattggtggtattggtaccgttcctgtcggtcgtgtggagactggtgtgctc
aagcctggtatggttgtgacctttggccctactggtctgacaactgaagtcaagtctgtt
gagatgcaccatgaagctctccaggaggcactccctggtgacaatgttgggtttaacgtt
aagaatgttgctgttaaggatctcaagcgtggttttgttgcctcaaactccaaggatgac
ccagccaagggagcatccaacttcacctcccaggtcatcatcatgaaccatcctggccag
atcggaaatggatatgcaccggtgcttgactgccacacttcccacattgctgtcaagttt
gctgagatcttgaccaagattgacaggcgttctggtaaggaacttgagaaagagcctaag
ttcttgaagaatggtgatgctggtatggttaagatgattcctaccaagcctatggttgtt
gagaccttctctgagtaccctccattgggtcgttttgctgtgagggacatgcgacaaact
gttgctgttggtgtcatcaagaacgttgacaagaaggacccaactggtgccaaggtcacc
aaggctgcccagaagaaaaagtga
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