Nicotiana sylvestris (wood tobacco): 104223443
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Entry
104223443 CDS
T05026
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
104223443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsy04131
]
104223443
03029 Mitochondrial biogenesis [BR:
nsy03029
]
104223443
Membrane trafficking [BR:
nsy04131
]
Autophagy
Autophagosome formation proteins
ULK complex
104223443
Atg1 complex
104223443
Mitochondrial biogenesis [BR:
nsy03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
104223443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
104223443
NCBI-ProteinID:
XP_009773192
UniProt:
A0A1U7VZJ9
LinkDB
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Position
3:153384301..153389380
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AA seq
608 aa
AA seq
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MDFQNNPQGEYGRFEQILAQFLLKTLHIVLDCRVPSIRPYGHSGEVKKSDKWFNLVLGDR
PAVLENLNFWHRNLMEPMIIDIILVQEKPSSLSEHSSGTAFAGAYTETIIERWVVQYEYL
RTMVPQVGESSYKKTYKKSIILLRSLYSMMRLLPAFKAFRKLSSTQSCDFDIIYKVSSFS
APFSRVEEELMKHYTFTPVDAQQGRFSISVSYRENLSDFNLEIAASFPPEIITDYVGSPL
TDPMRSFPSSSSDKDVRPTSFPSRGAQSSSSSPFQRPHSWTSGFLMSPSLPRTQPYVGSP
PLYRTPHELSSSPGDVYGQRVSPNNRLPIHHKATSFDEYQLSPPFSPSPSPSPPTYLSGA
NPGQSRLRSGTGPVSIPHPMMGTSSRYLSPNLSDPNRHSLPPMSPRSTKQDSSSNDSPSG
IRSFRKMDPLRTLESNISTMSPGQKISRDARDDSGRFSGLLSSSGSPRIFSRSSSRLSFQ
DDLDVFDFSCPFIVDDVDTSDSQVSENLDGRKGSEVSSQASATTRKSQDAAVGALVHMLR
TAPPLRQDSSCYTSHSVKTEQEGELGTASGFFINRKASDALEELKTYKDLKDLLLSKSAT
RSVSEGGT
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggattttcagaataatccacagggtgaatatggaaggtttgaacagatacttgctcag
tttcttctaaaaaccttgcatattgttttggactgtagagttccttcgatccgaccttat
ggtcatagtggagaggtgaaaaagagtgacaagtggttcaatttggtgttgggagatcgc
cctgctgttcttgaaaatttaaatttttggcacagaaatttgatggaaccaatgataata
gacataatacttgttcaagagaaacctagttctttgtcagagcatagttccggtacagca
ttcgcaggggcgtatacagaaaccatcatagagaggtgggttgtacaatatgagtatttg
aggacaatggttcctcaagttggtgaatcttcttacaagaaaacatacaagaaatcaatt
atactgctccgctccctttattcaatgatgaggctccttcctgcattcaaggccttcagg
aaactttcatcaactcagagttgtgactttgatatcatttacaaggtctcttcatttagt
gctccattctccagggtagaggaggagttgatgaagcattatacttttactccagttgat
gcccagcagggccgtttttctatatctgtgtcatatcgtgaaaatctgtccgactttaac
ctggagattgcagcatcctttccgcctgagatcatcacagattatgtaggcagtcctctt
actgacccaatgaggtcatttccttcttcctcatctgataaggatgtccgccctacatca
tttccgtcgagaggggcacagtcatcttcttcatcacctttccagcggccgcacagttgg
acaagtggtttcctcatgtcaccttctttacctcggacccagccatatgtaggatctcca
cctttgtaccgcacaccacatgagctttcatcttcacctggtgatgtatatgggcagagg
gtttcacctaacaacagattgcctatacaccacaaagcgacgagctttgatgagtaccag
ctttcacctccattttcaccatctccatccccatctccacccacatatttgtcaggagca
aatcctgggcagagtcgtttgcgttcaggaactggccctgtcagtatccctcatccaatg
atgggtacaagttccagatacctatctcctaatttgtctgatcctaacaggcattctctc
cctccaatgtctcccagaagcacaaagcaggattcatcatccaatgattccccttctgga
atcaggtcattccggaaaatggatccactaaggactctagagtctaatatcagcactatg
agtcctggacaaaagatttctagagatgctagagatgattcagggcggttctcgggtttg
ctatcttcaagtggttcgccacgtatattttctagaagttctagcagactgtcttttcaa
gatgacttggatgtctttgatttttcctgtccttttattgttgatgatgtcgatacttcc
gattcgcaagtcagtgagaaccttgatgggagaaaaggttcggaagtctcttctcaagca
tctgcaacaaccagaaaatctcaagatgccgctgtaggtgcccttgttcacatgctgaga
actgctcctcctctgcgccaagattctagctgttatacctcacatagcgtaaagactgaa
caggagggagaacttggaactgcatctggattttttatcaatagaaaggcatcagatgct
cttgaggagctcaaaacttacaaagatttgaaagatctactactgtccaagagtgcaacc
cgttcagtcagtgagggtggaacttaa
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