Nicotiana sylvestris (wood tobacco): 104223465
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Entry
104223465 CDS
T05026
Name
(RefSeq) chaperonin 60 subunit alpha 2, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104223465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104223465
03110 Chaperones and folding catalysts [BR:
nsy03110
]
104223465
03029 Mitochondrial biogenesis [BR:
nsy03029
]
104223465
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nsy04147
]
104223465
Enzymes [BR:
nsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
104223465
Messenger RNA biogenesis [BR:
nsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
104223465
Chaperones and folding catalysts [BR:
nsy03110
]
Heat shock proteins
HSP60 / Chaperonin
104223465
Mitochondrial biogenesis [BR:
nsy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
104223465
Exosome [BR:
nsy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104223465
Exosomal proteins of other body fluids (saliva and urine)
104223465
Exosomal proteins of breast cancer cells
104223465
Exosomal proteins of colorectal cancer cells
104223465
Exosomal proteins of bladder cancer cells
104223465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
104223465
NCBI-ProteinID:
XP_009773217
UniProt:
A0A1U7VZM2
LinkDB
All DBs
Position
2:64945220..64950067
Genome browser
AA seq
583 aa
AA seq
DB search
MSLPIFSPLFSPLKLSFLEDKGRCNSWALRQSFGKKKMMVVRAGPKRIAFDNECREALLS
GINKIADAVSVTLGPKGRNVVLSESGVLKVINDGVTIAQAIELPDTIENAGVTLIKEVAT
KTNSLAGDGTTTAIVLAREMVKAGLLAVAFGANPVSMKKGMEQTVRKLVKILKKKSYPIR
GNDDIKAVASISAGNDEFIGSLIAEAIKKIGPDGVICIESSSSAETSVMVEEGMKIDKGY
MSPHFINNPNKSIVEFENAKVLVTDQKISSVKEIVPLLEKATQLSVPLLIFAEDISSQVL
ETLVINKMQGMLNVAVVKCPGFGEGKKALLQDIALLTGADFLAGDLGLNLEGATSDQLGV
ARKITITSNSTTIVADPSTKAEIQARIMQIKKDLAETDSKYLSEKLSQRIAKLSGGVAIL
KVGAHTETELEDRKLRIEDAKSATFAAMDEGIVPGGGATFIHLSEHVPFIKELFQDPDEQ
IGADIIGMALLAPAKLIAANAGVDGDIVVEEVRGCDWQIGYNAMTGRYEDLLASGVIDPC
RVSRCALQNAVSVAGIVLTTQAIMVEKTKEPKPLVPQIPGITP
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgccaatcttttcacctttattctcccctttaaagctttctttcttggaagat
aaaggaaggtgtaattcgtgggcgttgaggcaaagctttgggaagaagaagatgatggtg
gtgagagctgggccaaagagaatagcttttgataatgaatgcagagaagctttactttct
ggtatcaataagattgctgatgctgtttctgtcaccttaggacctaaagggcgcaacgta
gttctctctgaatctggtgtgctgaaagtaattaatgatggtgttaccatagctcaagcc
atagaacttccagatacaattgaaaatgcaggagtcacacttatcaaggaggttgcaact
aagaccaacagtttagctggggatggtacaactactgcaattgttttggctcgtgagatg
gtcaaagctgggttgctagctgttgcttttggggctaaccctgtttctatgaagaaagga
atggagcagacagtaagaaagctggtcaaaattttgaagaagaaaagctatcccattaga
ggaaatgatgatattaaagctgtagcttcaatatcagctggaaatgatgagttcattggc
agtttgattgctgaggcaattaagaagattggtcctgatggcgtcatatgtattgagtct
tcctcatcagctgaaacctcagtcatggttgaagaaggaatgaagattgacaaggggtac
atgtcaccccatttcatcaacaatcccaacaaatctatagtagagtttgaaaatgccaaa
gttctggtaaccgatcaaaagatatcttctgtcaaagaaattgttcctttgctagagaag
gccacacagctgagtgtgccactgctgatttttgctgaggatatttcaagccaagtgcta
gaaacacttgtcattaacaagatgcaaggaatgcttaatgttgctgttgtgaaatgtcca
ggatttggagaaggaaagaaagctttattgcaagacattgccctattgacaggtgctgat
tttcttgctggagacttaggcctgaatcttgaaggtgcaacctcagatcagcttggtgtt
gctcggaaaataacaataacaagcaattctacgaccatcgtggctgacccctccacgaaa
gctgaaatacaagccagaataatgcagataaagaaggatcttgcagaaacagatagtaaa
tatttgtcagagaagctttcacaaagaatagcaaaactctctggtggtgtggccatattg
aaggtaggagcacatactgaaacagaactggaagaccgaaagctgagaattgaggatgca
aaaagtgctacatttgctgccatggatgaaggaatagtgcctggcggcggtgccactttt
attcatctctctgagcacgtgcccttcataaaagaattgtttcaagatccagatgagcag
atcggtgctgacataataggaatggcacttcttgcaccagcaaagctaatagccgcaaat
gcaggagtggatggagatatagttgtggaagaagttagaggttgtgactggcaaataggg
tataatgccatgactggaagatatgaagaccttcttgcttctggggttattgatccttgt
cgtgtttcaaggtgtgctcttcagaatgctgtctctgttgctggtatagtcctaactact
caagcaataatggtagagaaaaccaaggagcctaaaccgcttgttcctcagattcctggt
ataactccttaa
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