Nicotiana sylvestris (wood tobacco): 104223525
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Entry
104223525 CDS
T05026
Name
(RefSeq) uncharacterized protein isoform X1
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03460
Fanconi anemia pathway
nsy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104223525
09124 Replication and repair
03460 Fanconi anemia pathway
104223525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104223525
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104223525
Enzymes [BR:
nsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104223525
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104223525
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
104223525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCL_C
FANCL_d3
FANCL_d2
zf-HC5HC2H
zf-rbx1
SLX1_C
zf-HC5HC2H_2
zf-RING_2
zf-ANAPC11
PHD_NSD
Med29
Motif
Other DBs
NCBI-GeneID:
104223525
NCBI-ProteinID:
XP_009773284
UniProt:
A0A1U7WF58
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All DBs
Position
9:162686889..162696970
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AA seq
291 aa
AA seq
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MEYVDQNRCRELAKSSSFYRRIYSEVEEIGWEHLVKLGEDLRLLSFRMMDKKGRMHIVQI
TLDGTYPNHPPSISADMPYLFNVEWSINSRLKDVIRQFQQHMDKLQEFWNIMDDIDHSLL
VSDLRYPQRASSHRQLNIGNDCYIMFFIDANDPTSLPDCRFLGSDSEVERLRAMWRRNCK
RWMKDKPFSENLANVLDVQLHGPSSVEKTDPQTECGICYAQYLPIDDELGAKSGSGTDCT
CENNSCSRAFHSVCLGDWLSSITTTRQSFDVLFGNCPYCSDPIAVKINTRK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggagtatgtagaccaaaatagatgccgagaactggccaagtcatcatctttttaccgc
aggatatattcagaggtagaagagataggatgggagcaccttgttaaattgggggaagat
ctgagacttctcagctttcgtatgatggacaagaagggaaggatgcacattgtgcagata
actttggatggaacatatcctaaccatccaccttcaatatcagcggacatgccttatctc
ttcaatgtggaatggtcaataaactcaagactaaaagatgttatccgacagtttcagcag
catatggataagcttcaggagttttggaatataatggatgacattgaccactctcttttg
gtgtctgacctaagatatcctcaacgtgcttcgtcacatcgccaacttaatataggcaat
gactgctatatcatgttttttatagatgctaatgatccaacatccctaccagactgtcgc
tttctcggttcagattcagaggtggagagattgagggcgatgtggaggagaaactgcaaa
agatggatgaaagacaagccattttctgagaatcttgcaaatgtattggatgttcaactt
catggaccttcaagcgttgagaaaactgatccacaaactgaatgtggcatttgttatgcg
caatatcttccaattgatgatgaacttggtgctaagagtggaagtggcactgattgtaca
tgtgaaaataacagctgcagtagggccttccacagtgtttgcctcggagattggttgagt
tccatcacaacaacaagacagtcatttgatgttctattcgggaattgtccatactgttct
gatccaattgctgtcaaaatcaatactaggaagtaa
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