KEGG   Nicotiana sylvestris (wood tobacco): 104223750
Entry
104223750         CDS       T05026                                 
Name
(RefSeq) flap endonuclease 1-A isoform X1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03030  DNA replication
nsy03410  Base excision repair
nsy03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104223750
   03410 Base excision repair
    104223750
   03450 Non-homologous end-joining
    104223750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nsy03032]
    104223750
   03400 DNA repair and recombination proteins [BR:nsy03400]
    104223750
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nsy04147]
    104223750
DNA replication proteins [BR:nsy03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    104223750
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     104223750
DNA repair and recombination proteins [BR:nsy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     104223750
Exosome [BR:nsy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104223750
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc 5_3_exonuc_N HHH_5 HHH_2 XPG_I_2
Other DBs
NCBI-GeneID: 104223750
NCBI-ProteinID: XP_009773550
UniProt: A0A1U7WH31
LinkDB
Position
1:complement(128862586..128872503)
AA seq 410 aa
MGIKGLTKLLADNAPRGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE
TTSHLVGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSRREDATDDLAKATEIGN
KEDIEKFSKRTVKVTPQHNDDCKKLLRLMGVPVVEAPSEAEAQCAALCKAEKVYAVASED
MDSLTFGASRFLRHLMDPSSKKVPVMEFDISQILEELELSMDQFIDLCILCGCDYCDSIR
GIGPQTALKLVRQHGSMESILENINKERYQIPDDWPYEEARRLFKEPLVTDDEQTELKWA
APDEEGLINFLVKENGFNIDRVTKAVEKIKTAKTKSSQGRLESFFKPVSTSAPVKRKGTK
CVLVSPNPVTKFKTLSVQSRPMLLGSQIFPSLDLGSNYSVPLSRHVCFGT
NT seq 1233 nt   +upstreamnt  +downstreamnt
atgggaattaagggtttaacgaagctattggcggacaatgcgccaaggggaatgaaagag
cagaaatttgagagctattttggccgtaaaatagccatcgacgctagtatgagcatttac
cagttcctgattgtggtaggacgaagcggtacggaaatgctcacgaatgaagctggggaa
actactagtcatttggttgggatgttttcccggacaattaggcttttggaagctggaatc
aagccagtttatgtttttgatgggaaacccccagatctgaagaaacaagaacttgcaaaa
cgttactctagaagggaagatgccacagatgatttggctaaggctacagagattggcaac
aaggaggatattgagaaattcagcaagagaaccgtaaaggttacaccccaacacaatgat
gactgcaagaaacttcttagactgatgggtgtacctgttgttgaggctccttctgaagca
gaggctcagtgtgctgcactttgcaaggccgaaaaggtctatgctgtagcctcagaagat
atggattccttaacttttggagcttcaaggtttcttcgccatttaatggatcctagctcc
aaaaaggttccagtgatggaatttgatatctcccagatattagaggagctcgaacttagt
atggatcagttcattgacttgtgcattctctgtggatgtgattactgtgatagcatccga
ggcatagggccccagactgctttgaagcttgtacgccaacatgggtcaatggagagcata
ttggagaatattaacaaagagagatatcaaatacctgatgattggccatatgaagaggct
agacggctcttcaaggaaccattagttacagatgatgagcaaactgaactaaagtgggct
gctcctgacgaagaaggattgattaactttctggtgaaggaaaatggattcaacattgat
agagttacaaaggcagtagaaaagatcaagacagccaagaccaagtcttctcagggacgg
ctagaatcattctttaaaccagttagcacatctgctccagttaaaagaaaggggactaaa
tgtgttcttgtatctccaaatcctgttaccaagtttaagacactctccgtacaatccaga
cccatgctccttggcagccaaatcttcccgtctttagatttgggatctaattactccgtg
ccgttatcaagacacgtctgctttggcacatga

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