KEGG   Nicotiana sylvestris (wood tobacco): 104223956
Entry
104223956         CDS       T05026                                 
Name
(RefSeq) cyclin-T1-3-like
  KO
K15188  cyclin T
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    104223956
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nsy03021]
    104223956
Transcription machinery [BR:nsy03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     104223956
    Brd4/P-TEFb complex
     104223956
    7SK RNP complex
     104223956
SSDB
Motif
Pfam: Cyclin_N CycT2-like_C Cyclin_C Terminase_6 TFIIB Cyclin_C_2
Other DBs
NCBI-GeneID: 104223956
NCBI-ProteinID: XP_009773798
UniProt: A0A1U7W5B0
LinkDB
Position
12:complement(164943638..164954388)
AA seq 632 aa
MAGLMSGDPLTHHGAYEGGSFRASQERPDDSGGRWYFSRKEIEENSPSRQDGIDLKKETY
LRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHTRNDRRSIATVCMFLAGKVEE
TPRPLKDVILVSYEIIHKKDAAAAQRIKQKEVYEHQKELLLQGERVVLATLGFDLNVHHP
YKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLRVKLP
SDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRVQPSQASEAEGSAGGNQRPAGKASVAN
EEHAANNSNSLGGAANSNAGTSNRASSRAIPDQPYADNHSGPSEAAQTSTNNYGSTENYA
SDRIGDDEISDRQKLESEQLAYQGNAAEVQSRSKYGSESHDEDDQEENTGKAETRRKGEP
KEKYHGRALENKDGRLGQSPQGVKKIDKDKVKAAVENKVKAALEKRRKSQGDVTRKTDVM
DDDDLIERELEDGIELAAGNEKIKRERKESWTKPSNRLEHENTYHEKHQDEAGDGHHQGS
KRQSSRGEDYDYVEEGELEPYDDADKVYRSPKSNSRKRKASSPSEKLEGKRDEYITGTHN
QTYQDFPDDRNGAGRLDYSERDHKRHMQENHA
NT seq 1899 nt   +upstreamnt  +downstreamnt
atggctggtctgatgtctggtgatcccttgacgcatcatggagcttatgaaggtggaagt
tttagggcttctcaagaaaggccagatgacagtggtggtcgttggtatttctccaggaag
gaaattgaagagaactccccatcgcgacaagatggtatagatttgaagaaagagacttat
ctacgcaagtcatattgtacattcctgcaagatttgggcatgaggcttaaagtgcctcag
gtaacaattgccactgcaataatattttgtcatcggttctttcttcggcaatctcatacc
aggaatgataggaggagcattgccacagtatgcatgttcctcgcaggaaaggttgaagaa
actcctcgtcccctgaaagatgttatacttgtttcttatgagatcattcataagaaggat
gctgcagcagcgcagaggattaagcaaaaggaagtatacgaacaccaaaaagaactactt
ctgcagggagagagggttgttcttgcaactcttggttttgatcttaatgtacatcatcca
tataaaccccttgttgaggcgataaagaaattcaaggttgctcagaacgccctagctcaa
gttgcatggaactttgtgaatgatgggcttcggacgtccttatgcttgcaatttaagccc
catcacattgcagcaggtgccattttccttgcagccaagtttctcagagtaaagctccca
tctgatggcgagaaggtttggtggcaggagtttgatgtcaccccacgccaactggaggag
gtgagcaaccaaatgctagaattgtatgaacaaaatagagtacaaccttctcaggctagt
gaagcagaaggaagtgctggtggaaatcaaaggcctgcaggaaaagcttcagttgcaaat
gaagagcatgctgcaaataacagtaattctctgggtggagctgcaaattcaaatgcagga
acctccaatcgtgcatcttctagggcaattcctgatcaaccatatgctgataatcacagt
gggccctccgaagctgctcaaactagcactaataactatggaagtactgaaaattatgct
tcagatcgtattggagatgatgagattagtgataggcagaagcttgaaagtgagcagttg
gcttatcagggtaatgcagcagaggtacaaagtagatcaaagtatggttctgaaagccat
gatgaagatgatcaggaagagaacactgggaaagctgaaacaaggcgtaaaggggaacca
aaggagaagtaccatggtcgagccctggagaacaaggatggcagacttggccagtcaccg
caaggagttaaaaagatagataaagacaaggtcaaagcagctgttgagaacaaggtcaag
gcagcattggagaaacgcagaaaatcccaaggggatgtaaccaggaaaactgatgttatg
gatgacgatgatctcattgagagggaattggaggatggaatagaactggcagctgggaat
gagaaaatcaaacgggaaagaaaagaaagctggaccaagccttcaaacaggctggagcat
gagaacacatatcatgaaaagcatcaagatgaagctggggacgggcatcaccaagggtca
aaacggcagtcttcacgtggggaagattacgactatgttgaagaaggggaactggaacca
tatgatgatgctgacaaggtatatcggtcaccaaagtctaacagtaggaagagaaaggca
agtagcccctcagaaaaactggagggaaagcgggatgagtatataacagggacccacaat
caaacttaccaagattttccagatgatagaaacggggctgggaggcttgattattctgag
agggaccacaaaaggcacatgcaggaaaatcatgcctga

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