Nicotiana sylvestris (wood tobacco): 104224160
Help
Entry
104224160 CDS
T05026
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03018
RNA degradation
nsy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104224160
09123 Folding, sorting and degradation
03018 RNA degradation
104224160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104224160
03041 Spliceosome [BR:
nsy03041
]
104224160
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104224160
mRNA degradation factors
5'-3' decay
Lsm complex
104224160
Spliceosome [BR:
nsy03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104224160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
DUF150_C
SM-ATX
Motif
Other DBs
NCBI-GeneID:
104224160
NCBI-ProteinID:
XP_009774049
UniProt:
A0A1U7WHD6
LinkDB
All DBs
Position
9:complement(24053424..24060940)
Genome browser
AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVEGTLKGYDQLLNLVLDEAKEYLRDADDPLKT
TEQTRALGLIVCRGTAVMLVAPTDGTDEISNPFVQPDGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcagaaaagaaactgttttagatttggcaaaatttgttgacaagggtgtgcag
gtcaagcttacaggtggtagacaagtggaaggaacacttaaaggctatgatcagctgcta
aatcttgtcttggatgaagccaaggagtaccttagagatgctgatgatcccctgaagact
accgagcagacacgagctcttggcttaatagtctgcaggggtacggcagtaatgctcgtg
gctccaactgatggtacagatgagatttccaatccttttgtccagccagatggggcatag
DBGET
integrated database retrieval system