Nicotiana sylvestris (wood tobacco): 104224513
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Entry
104224513 CDS
T05026
Name
(RefSeq) U-box domain-containing protein 13-like isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104224513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104224513
Enzymes [BR:
nsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104224513
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
U-box type E3
104224513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
U-box
Neurochondrin
Arm_2
HEAT_2
MLKL_N
KAP
zf-Nse
zf-RING_UBOX
HEAT_EZ
MCAfunc
MG280
DUF6240
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
104224513
NCBI-ProteinID:
XP_009774522
UniProt:
A0A1U7W3A0
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All DBs
Position
6:complement(120877526..120884937)
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AA seq
665 aa
AA seq
DB search
MGEEKRALAQKLIEIVNEISGISEFRISVKKEYCNLGRRLKLLIPMFEEIRDNDVPVSED
SIKALVSLKEALESTKDLLKFGSEGSKIYLVLEREQIMNKFHEVTAQLEQALSGVHYEEL
DISDEVKEQVELVLSQFQRAKGRVDTPGTELHEDLLSIYSKSIDAAIDPVVLRQLVEKLQ
LTGIDDLTQESCALHGMITATGDDIEERIEKMSVILRKMKVFVLTENPERDSSSREKSST
CSGQASTGTTYKAPVIPDDFRCPISLELMKDPVIVSSGQTYERSSIEKWLEAGHRTCPKT
QQVLTSNTLTPNYVLRSLIAQWCEANGVEPPKRPGSLPNKATSACTPAEHSKIEDLLRKL
TSGKPEDRLSATGEIRLLAKRNADNRVAIAEAGAIPLLVDLLSTPDSRIQEHAVTALLNL
SICEDNKRSIVTSGAVPGIVHVLKKGSMEARENAAAALFSLSVIDENKVIIGTYGAISPL
VTLLSDGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMQLLTEPQGGMVDEALAIL
AILASHPEGKAAIGAAGAVPVLVNVIANGSPRNKENAVAVLVHLCSGDQHHIVEVQELEV
MGPLLDLVQNGTDRGKRKATQLLERINRYAEQQKQPQLQAEAPVHAQIHNQLSQSPPSST
DSLDS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagaaaaaagagcgttggcgcaaaagctgattgagatagtgaatgaaatatca
ggcatttcggagttcaggatttcagtgaagaaagagtactgcaatctgggaaggaggctc
aagttgttgattccaatgttcgaagagattcgagataatgacgtgccagtttctgaagac
tcgataaaagcacttgtttcactgaaggaagctcttgaatcaactaaggatttgctcaaa
ttcggtagcgaaggaagtaagatttatctggtgttagaaagggagcagataatgaataaa
tttcacgaagtgacagctcagctagaacaagctttaagtggagttcattatgaagagctt
gacatttctgatgaagttaaagagcaggtagagcttgttctttctcagttccaaagagcc
aaaggaagggttgatacgcctggtaccgaactacatgaggatctattgtccatttatagt
aagagtattgatgctgctatagatccagttgtcctaaggcaattggttgagaagttacag
ctgactggaatagatgatctcacacaagagtcatgtgctttgcatggaatgatcactgct
actggcgacgatatagaggagaggatagagaagatgtcagtaatattgaggaaaatgaag
gtctttgtgctgactgagaatccagagagggattcttcttcgagggagaagtcttcaact
tgtagcggacaagcatctacagggacaacttataaggccccagtaatacctgatgatttt
cggtgtcctatatccctggaattgatgaaagaccctgtcattgtttcatctgggcagact
tatgagcgttcttctattgagaagtggctggaagcagggcatagaacttgtcccaagaca
caacaagtcctcacaagcaatactctcactccaaactatgtgttgcgaagcctcatagca
cagtggtgtgaagcgaatggggttgaaccacccaaacgaccaggtagtttacccaataag
gcaacatccgcatgcacgcctgctgagcactcaaagatagaagatctcctgagaaagctc
acatctggcaaacctgaagatcggctctctgccacaggtgaaatccgcctacttgctaag
cgcaatgctgataatcgtgttgcaatagctgaagcaggtgctattcctctgctcgtcgac
cttctttccacacccgattctcggatccaagagcatgctgttacagcactacttaacctc
tctatttgtgaggataacaaacggagcattgtaacatcaggggcagtgcctggtatcgtc
catgtgcttaagaaggggagcatggaagcacgtgaaaatgcggcagccgccctatttagc
ctttctgttatagatgaaaataaggtcataattggtacttatggagcaatttctccactt
gtgacattactaagtgatggcacccagagagggaagaaagatgcagctaccgcacttttc
aatctgtgcatttatcaagggaacaagggcaaggcagtaagggctggagttgtgcccact
ctaatgcagctgcttactgaacctcaaggtggtatggtcgatgaggcacttgccatttta
gcaatattggctagtcacccagaagggaaggcagccattggagctgcaggggcagttcct
gttttggtaaatgtgattgcaaatgggtctcccaggaacaaagaaaatgcagttgcagtt
ttggtacatctctgttctggggaccaacatcatatagtagaggttcaggagctagaagta
atggggccgttgctagatttagtacaaaatggcactgataggggcaaacgaaaagcaact
cagttgcttgaacgaataaacagatatgctgagcagcaaaagcagccccagttacaagct
gaagctccagtccatgctcaaattcataaccagctctcacagtcgccaccctcatccaca
gattccctggacagctga
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