Nicotiana sylvestris (wood tobacco): 104224573
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Entry
104224573 CDS
T05026
Name
(RefSeq) DNA repair protein recA homolog 1, chloroplastic isoform X2
KO
K03553
recombination protein RecA
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104224573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104224573
DNA repair and recombination proteins [BR:
nsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
104224573
RecFOR pathway proteins
104224573
TLS (translesion DNA synthesis) factors
Other SOS response factors
104224573
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RecA
RecA_C
ATPase
Rad51
AAA_25
ATPase_2
AAA_24
AAA_16
AAA
ABC_tran
Motif
Other DBs
NCBI-GeneID:
104224573
NCBI-ProteinID:
XP_009774552
UniProt:
A0A1U7W3D0
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Position
11:75547125..75557386
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AA seq
419 aa
AA seq
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MDLSFPVKAQLFGSNICYKSPSYSTSVKLYHKVSRPQFSVHGIRVRSEFDHKVNGAFSPD
YDARFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLPKG
RIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQP
DNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMS
GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSAKGDEE
VGLKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAELIDVVSKKGSWYNYGEHR
LGQGREKALQYLRENPLLSEEIEKMVRSSVVDATGFLGSSSSKHPLPQLQEEDALQEMQ
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggatttaagcttcccagtgaaagctcagctttttggctccaacatttgttacaagtcc
cctagctactctacttcagtaaaactctaccacaaagtatctcgacctcaattttcagta
catggaattagggttcgttcagaatttgaccacaaagtcaatggagctttctctcccgat
tatgacgctcgcttcctcgaccggcaaaaggcattggaagctgcaatgaatgatataaat
agctcctttggcaaaggaagcgtcactagattgggtagtgctggtggagctcttgttgaa
actttcccaagtggctgcttgacgcttgactttgctttaggtggtggccttcccaaaggg
agaattgttgagatatatggacctgaaagtagcggaaagactaccttagctctccatgct
attgcggaagtacagaagctaggaggcaatgcaatgcttgttgatgctgagcatgctttt
gatcctgcatactctaaagcacttggagtagatgtagagaatttgattgtctgccaacct
gataacggagagatggctctagaaatcgcagaccgaatgtgcagatcgggtgctatagat
ctcatttgtattgattcagtttcagcccttactccgcgggctgaaattgagggagaaatt
gggatgcagcaaatgggtttacaagcacgcctgatgagtcaagctttacgtaaaatgtca
ggcaatgcttcgaaagctggatgtactcttatattcctcaatcagataagatacaagatt
ggtgtttattatggaaatcctgaggtcacaagtggagggattgccttgaagtttttcgcc
tcagttcgacttgagatccgttctacaggaaagataaaatctgcaaaaggagatgaggaa
gtgggccttaaggtccgggtaagagttcaaaagagcaaggtttctaggccatacaagcaa
gcagaatttgaaattatctttggagaaggagtgagcaagctgggttgcgtattagattgt
gctgaactgattgacgtggtatctaaaaagggttcatggtataactatggggagcacagg
ctgggacagggacgggagaaagcattgcagtatttgagagagaatcctcttctctctgaa
gaaatagagaagatggttcgctcatccgtggtagacgcaactgggtttttaggctcttct
tcatcaaaacacccactgccacagcttcaagaggaagatgcacttcaagagatgcaataa
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