KEGG   Nicotiana sylvestris (wood tobacco): 104225340
Entry
104225340         CDS       T05026                                 
Name
(RefSeq) replication factor C subunit 4-like
  KO
K10755  replication factor C subunit 2/4
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03030  DNA replication
nsy03410  Base excision repair
nsy03420  Nucleotide excision repair
nsy03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104225340
   03410 Base excision repair
    104225340
   03420 Nucleotide excision repair
    104225340
   03430 Mismatch repair
    104225340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nsy03032]
    104225340
   03036 Chromosome and associated proteins [BR:nsy03036]
    104225340
   03400 DNA repair and recombination proteins [BR:nsy03400]
    104225340
DNA replication proteins [BR:nsy03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104225340
  DNA Replication Termination Factors
   ELG1-RFC complex
    104225340
Chromosome and associated proteins [BR:nsy03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    104225340
DNA repair and recombination proteins [BR:nsy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104225340
  Check point factors
   HRAD17(Rad24)-RFC complex
    104225340
SSDB
Motif
Pfam: AAA AAA_11 nSTAND_NTPase5 AAA_28 nSTAND3 AAA_22 AAA_30
Other DBs
NCBI-GeneID: 104225340
NCBI-ProteinID: XP_070014840
LinkDB
Position
10:31583672..31587775
AA seq 255 aa
MCLTFAGLQFCYCDLSFNLLKSISPEYEGPPGTGKTTSILALAHELLGPNYKEAVLELNA
SDDRLSDQEILGLLMVVVAAEKVNRSVKSPVDISMDITRLIQTLNMSTTAFRDSVKMTLE
AEHTSTSHQKMLFSVGLLFVVKVLEPMNSCLLFFYYPWKAPKRSNNWCISTVLNLSHLLF
ARMSSLDCILRFIGSSEGIVLLLSSGRHQTADVGISQPLDSNEISNEGHREDSGDFHDFL
KDGSETLYEGSKFQS
NT seq 768 nt   +upstreamnt  +downstreamnt
atgtgtttgacttttgccggattacagttttgctactgcgacctcagttttaatctcttg
aagtcaataagtcctgaatatgaaggtcctcctggtactggcaaaaccactagtatattg
gctcttgctcatgagcttttgggaccaaactataaagaggccgttttggagctaaatgca
tcagatgatagattatctgaccaagagatccttggactccttatggttgtggttgcagca
gaaaaggttaaccgcagtgttaaatctccagtagatatatccatggatatcaccagattg
attcagacactcaatatgtcaaccactgcatttagggatagtgttaaaatgacacttgaa
gctgaacatacttcaacatcacaccagaagatgttgttctctgttggccttctctttgtg
gtaaaggttcttgaaccaatgaattcttgcttactctttttttattatccatggaaagct
cctaagagaagtaacaattggtgtatttccaccgtgttaaatttaagtcacttgctcttt
gccagaatgtcatctttggattgtatactgaggttcattggatcttctgaagggatagtt
ctcttgctgtcgagtggtcggcaccaaacggctgatgtagggatatctcaaccattggac
tcaaatgaaatatcaaatgaggggcatagggaggattctggtgactttcatgattttctc
aaagatggaagtgaaacattgtatgaaggcagcaagttccaaagctag

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