KEGG   Nicotiana sylvestris (wood tobacco): 104225404
Entry
104225404         CDS       T05026                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RMA1H1-like
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    104225404
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nsy04121]
    104225404
Enzymes [BR:nsy01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104225404
Ubiquitin system [BR:nsy04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104225404
SSDB
Motif
Pfam: zf-C3HC4 RING_XB3-XBAT31 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-RING_5 U-box Prok-RING_4
Other DBs
NCBI-GeneID: 104225404
NCBI-ProteinID: XP_009775485
UniProt: A0A1U7WMK1
LinkDB
Position
6:complement(25467489..25469508)
AA seq 245 aa
MALEQLFQEQITDINFDERDISLEKCKTVDDELDDNVSGGFECNICLDLVHDPVITFCGH
LYCWPCIYKWIHFQSKSSENTDYQQPQCPVCKAEISQKTLIPLYGRGQTTKPSEGKALNL
GIVIPQRPPSPRCGGHHTLIATNESHPSQQLHNRNYPQQSPTHQPYSSSYMSEPMLSPGG
TTTGELVYARMFGNSSTTLYTYPSSYNLAGSSSPRLRRQLVQADRSLSRICFFLCCCLVT
CLLLF
NT seq 738 nt   +upstreamnt  +downstreamnt
atggccttagagcagcttttccaggagcaaataacagacatcaactttgacgaacgcgat
atttcgttggagaagtgtaagacagttgatgatgagcttgacgacaatgtctctggaggt
tttgagtgtaacatatgcttggatcttgtacatgatcctgttattaccttctgtggtcac
ctttattgttggccttgcatctataaatggattcattttcagagtaaatcgtctgaaaat
actgattaccaacagccacaatgtcctgtttgcaaagctgaaatctcgcagaaaactttg
attccactatatggtcgcggccaaactacaaaaccatccgaaggaaaggccctgaatctt
ggcatagtcattccacaaaggcctcctagtccgagatgtgggggtcatcacacactgata
gcaactaacgaatcacatccatcgcagcaacttcacaatcgaaattatcctcagcaatct
ccaacacatcaaccttattcttctagctacatgtccgaacctatgctaagtcctggtggc
acgacaacaggagaattggtttatgcgcggatgtttgggaactcatcgactactttgtat
acatatccgagctcatataatctagctggcagcagtagtccaaggctaagaaggcaacta
gtacaggctgatagatcgcttagcagaatctgttttttcctatgttgttgtttagtgaca
tgtcttctcttgttctga

DBGET integrated database retrieval system