Nicotiana sylvestris (wood tobacco): 104225512
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Entry
104225512 CDS
T05026
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00040
Pentose and glucuronate interconversions
nsy01100
Metabolic pathways
Module
nsy_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104225512
Enzymes [BR:
nsy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104225512
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
104225512
NCBI-ProteinID:
XP_009775637
UniProt:
A0A1U7W6I6
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Position
12:complement(34332873..34335511)
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AA seq
394 aa
AA seq
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MAKLLISWCFVFFFCFGFIFLKSNAASVTYNVLSFGAKSDGKSDATQPFLKAWVAACSSV
KSATIYVPRGQYLIKAATFRGPCKSKITVKIDGTLVAPADYRAVGNSGYWILFIKVSRIS
VVGGTLDGNGAGFWACRKTGKNCPVGARSITFNWANDVVIKGLTSVNSQLMHLVINSCKN
VMVKNVRIIAPDLSPNTDGIHVQSSTGVTITGTSIKTGDDCISVGPGTRNLWMEKIQCGP
GHGVSIGSLARDYKEDGVQNVTLINSVFSGSDNGLRIKSWARPSTGFVTNINYQNIIMRN
VDNPIIIDQNYCPNNQGCPGQTSGVKINQVTYKNILGTSATKVAMTFDCSPSNPCSGIKL
QDIKLTYLNGKAQSICKNIRGNTGGIILPDNCLY
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcttttaatttcttggtgttttgtcttcttcttttgttttggattcattttc
ttgaaatcaaatgcagcatcagtaacgtacaatgtgttaagctttggagcaaaatcagac
ggcaaaagtgatgcaactcagccatttctgaaagcatgggtagctgcatgcagctcagtg
aagtcagccaccatttacgttcctcgtggacagtacttaattaaggcagcaacttttaga
gggccatgcaaaagtaaaatcactgtaaaaatcgatggaactcttgtggctccggcggat
tatcgcgccgttggcaactccggctactggattttgtttattaaggttagccggatttcg
gtcgtgggaggaactcttgatggaaatggagctggattttgggcttgccggaagacaggg
aagaattgccctgttggtgctaggtctataacgttcaactgggcaaatgatgttgtgatt
aaaggcttaacatcagtcaatagccagctaatgcacttggtgatcaatagctgcaagaat
gtgatggttaaaaatgtaagaataatagcaccagacttaagtcccaatactgatggcatt
catgtccaatcttcaactggtgttactatcactggtacaagtatcaaaactggagatgat
tgtatatctgttggccctggcacaagaaacctttggatggaaaagattcaatgtggccct
ggccatggtgttagcattggaagtctagcaagagattacaaagaagatggtgtgcagaac
gtgacattaattaattcagtattttctggatctgataatggattaagaataaagtcttgg
gcaagacccagcactggttttgtcaccaacattaattatcaaaacattatcatgaggaat
gttgacaatccaatcatcattgatcaaaattactgtcccaacaaccaaggctgtccaggc
cagacttctggtgtaaagatcaatcaagtgacgtacaaaaatatattaggaacatcagca
acgaaagtagccatgacttttgactgcagtccaagcaatccatgcagcggaataaagtta
caagacataaagcttacttatttgaacggaaaagctcaatctatttgcaagaatattaga
ggaaatactggaggaatcatcttgcctgataattgtttatattaa
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