Nicotiana sylvestris (wood tobacco): 104225995
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Entry
104225995 CDS
T05026
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03440
Homologous recombination
nsy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104225995
03460 Fanconi anemia pathway
104225995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104225995
03036 Chromosome and associated proteins [BR:
nsy03036
]
104225995
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104225995
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
104225995
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
104225995
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
104225995
FA (Fanconi anemia) pathway
Downstream FA components
104225995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Tower
Motif
Other DBs
NCBI-GeneID:
104225995
NCBI-ProteinID:
XP_009776180
UniProt:
A0A1U7WFZ4
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Position
3:34269..59068
Genome browser
AA seq
1127 aa
AA seq
DB search
MPTWQLYSAAGNDFRWKISDEETKIEEPSLALAAPQQLQSMADLLRQGSSKLAGSSDTSF
TTNFPVFRTGSGKPVAVKQASISRALSILNDKNNLVPDTGQGIRRENSFAFQEAAFQKGP
GKALNAPESFFSSGLEKQFNTSNSMFQTGSGKAVSISSAGLNRAKAVLGLEENGDNRSSD
ERFGFRSSVPFVAVEGIANTWSTKASAASLSPFDVKLNSSVCAAEDLVPDFLHCADKPPP
IKFHTAGGRSISVSSEALKRARSLLGDPELGSLVDEKDVVDPLFSFPKDQKSVDQSSIKE
LNSDTPVSLLSAAKGNGSSSLFTPPFGSTLYHKKSSVKTENLAPASNLMKEFDAVAKEST
SRPDHSIPQHGEAFNKNSAAVDLRENDISSKPKLLQRPSRGPLVDISNNIGAGSADRNQN
FGQKRKPGRGSFVSPFKKPRIAKIVTPLKRNDSGASNGFSNSAPQLPSQKGKVSVRYPFH
VARLYMKEYLGDPPSFQSKLENLPDEVRRMNPDIAETHVFNDKSCSGCIGVKSFWEMLSQ
SGASMQYVSKEWVTNHYKWIVWKLASYERCYSTKFSGKLLTICNVLEELKYRYEREVNYG
HRSAIKRILEGDIPSSSMMVLCVSKVYSICNSPVGPQFSLSNTTGNRACAKIELTDGWYS
ITAVLDILLSKKLAAGKLFVGQKLRIWGARFCGWTGPVSPLEASGTTSLLLHINGTYRAH
WASRLGLCKGGAIPLSFLSVKDGGGSVPLTLVGISRIYPVLYRERLSNGGFVVRSERMEA
KEMQSFNQRRCRVVEGITSESQRAKRDAYIGSDHESEEGARVLKILERAAEPELLMAEMS
KEQLNAFASYQAKLEASRQSDLQKSLEKALQAAGLAERDVTPFMRVRVVGLTSKSTPSKC
CPQEGLITIWNPTEKQQSELAEGQAFAVTGLTPISSDSSTLYLQAKGSTAKWRPLSPMAI
EGFEPFFCPRRSVPLSKLGEVPTSREFDIAAVVVFVGQLYTGAHQSKQWVFVADGSPFTL
DSNDESETLMATSFTSPCIETDSFAPINSNLVGSVVSFCNLIKRARDNVNNLWVAEATEN
STYYLNFDHSHCSHLKEASASAERWAKISGSRLEKLRGKVLSIISCS
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgtggcagttgtactccgccgccgggaatgatttccgatggaaaatctccgat
gaagagactaaaatcgaagagccgagcttagccctagcagctcctcagcagctccaatcc
atggccgacctcttgcgtcaaggaagttcgaaattagcggggagtagtgatacaagtttc
acgacgaattttccagtttttcgaactggatccgggaagcctgtggcagtgaagcaggct
tcgatatcaagagctctttcgatccttaatgataaaaacaatttggtcccagacacagga
caagggattagaagagagaacagttttgcctttcaggaagctgctttccagaaaggccca
gggaaagctcttaatgctccagaatcttttttctcttctggcttggagaaacaatttaac
acgtcgaactcaatgttccagacaggctctggtaaagcagttagtatatcttccgcaggt
cttaatagggccaaggcagtgttgggcttggaagaaaatggtgacaatcgatcttcagac
gagcgctttgggtttcggagttcagttcctttcgtggcagtagaggggattgctaacaca
tggtctactaaagcttcagcagcttcattgtctccgtttgatgttaaacttaactcctca
gtttgtgcagcggaggatttagtaccagattttctgcattgtgcagataaacctcctccg
ataaagtttcatactgctggtggtagatcaatatcagtttcttctgaggcattgaaacgt
gcaaggagtttgcttggagatccagagctgggatctcttgtagatgaaaaggatgtggtt
gatccattgttttcttttccaaaagaccaaaaatctgttgatcagtcctccattaaagaa
ttaaactcagatactcctgtttccctcttatcggcagcaaaaggcaatggctcgtcaagc
ctttttacacccccatttggatcaactttgtaccataagaagtcttcggttaaaacagag
aatctcgctccagcaagtaacttgatgaaggagtttgatgctgtggcaaaagaaagcacg
agtaggccggaccatagtattcctcagcatggagaggcattcaacaagaactcagcagct
gttgacctaagagaaaatgacatctcttcaaaacctaaattgctacaaaggccttctagg
ggtcctttggtggatatctcaaataacattggagctggatctgcagatagaaaccaaaac
tttggtcagaagaggaaacctggaagggggagttttgtttctccattcaagaagcctcga
attgccaaaattgtcactcctctcaaaagaaacgattccggtgcttctaatggattctca
aattcagcaccacaattaccctctcaaaaaggaaaagtttcagttcgatatccattccat
gttgcacgattgtatatgaaggagtatcttggggatcccccatcattccagagcaagcta
gagaatctgccagatgaagtgagaaggatgaatccagatattgctgaaactcatgtgttc
aatgataaatcttgctcaggttgcattggagtaaagtctttctgggagatgctgtcgcaa
tcaggggcttctatgcaatatgtctctaaagagtgggttacaaatcactacaagtggatt
gtttggaaacttgcatcttatgagaggtgttatagtaccaaattttctgggaagcttttg
acaatctgcaatgtgcttgaagaattaaagtacagatatgaaagagaagtaaattatggt
catcgatctgcaattaagagaattctagaaggagacatcccatcttcttctatgatggtg
ctttgcgtttccaaggtctattcaatttgcaactccccagttggacctcaattttctttg
tctaacacgaccggaaatagagcttgtgcaaaaattgaactgacagatggatggtattca
attactgctgtcttagatatactattatccaagaagttggctgctggaaagctgtttgtt
ggccaaaagcttaggatctggggagctcgattctgtggctggacaggtcctgtttcacca
cttgaggcgtcaggaacgactagtttgctactgcatataaatgggacatatagagctcat
tgggcatctcgtttggggttatgtaaaggtggtgccattccattatcatttttgtcagtc
aaggatggtggaggttctgttccacttacattggtcggaatttcaaggatatatcctgtt
ctctacagggaaaggttaagtaatgggggtttcgttgtaagatctgaaaggatggaagct
aaagagatgcagtcttttaatcaaagacgctgtagagttgtggagggaataacctcagaa
tctcaaagggcaaagagagatgcgtacattggaagtgaccatgaaagtgaagaaggggca
agagttttgaagatactagagagagctgcagaaccagaacttctgatggcagagatgtct
aaagagcagttgaatgcatttgcatcctatcaagcaaagttggaggcatcgaggcagtct
gacctgcagaaatctcttgaaaaagctttgcaagctgctggacttgctgaaagagacgtc
actccttttatgcgagttagagttgttggtttgactagcaaaagtactccatcgaagtgc
tgcccacaggaaggcttaattacaatttggaatccaactgagaaacagcaatccgagctt
gcagagggtcaagcttttgctgttacagggcttacaccgataagctcagactcgagcacc
ctttatttgcaagcaaaagggtccacagccaaatggcgacctttgtctcctatggcaatt
gagggttttgagccctttttttgtcctcgccgatctgttccattgagtaaattgggtgaa
gttcctacgtccagggagtttgatatcgctgcagtggttgtttttgtggggcagctgtat
acaggagctcatcaaagtaagcagtgggtatttgtagctgatggatccccatttacattg
gattccaatgatgaatcagaaaccttgatggccactagcttcacctcaccatgcatagaa
actgactcatttgcaccaataaactctaaccttgtagggtctgtggtttccttttgcaat
ctcatcaagagagcaagagataatgttaataacctctgggtagctgaagcaacagaaaat
tcgacctattatttaaattttgatcattcacattgttctcatctgaaagaagccagcgct
tctgctgaaagatgggcaaagatatctggttcgagacttgaaaagcttagggggaaagtt
ctatctataattagctgcagctga
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