Nicotiana sylvestris (wood tobacco): 104225995
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Entry
104225995 CDS
T05026
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03440
Homologous recombination
nsy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104225995
03460 Fanconi anemia pathway
104225995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104225995
03036 Chromosome and associated proteins [BR:
nsy03036
]
104225995
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104225995
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
104225995
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
104225995
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
104225995
FA (Fanconi anemia) pathway
Downstream FA components
104225995
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Tower
Motif
Other DBs
NCBI-GeneID:
104225995
NCBI-ProteinID:
XP_009776180
UniProt:
A0A1U7WFZ4
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All DBs
Position
3:34269..59068
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AA seq
1127 aa
AA seq
DB search
MPTWQLYSAAGNDFRWKISDEETKIEEPSLALAAPQQLQSMADLLRQGSSKLAGSSDTSF
TTNFPVFRTGSGKPVAVKQASISRALSILNDKNNLVPDTGQGIRRENSFAFQEAAFQKGP
GKALNAPESFFSSGLEKQFNTSNSMFQTGSGKAVSISSAGLNRAKAVLGLEENGDNRSSD
ERFGFRSSVPFVAVEGIANTWSTKASAASLSPFDVKLNSSVCAAEDLVPDFLHCADKPPP
IKFHTAGGRSISVSSEALKRARSLLGDPELGSLVDEKDVVDPLFSFPKDQKSVDQSSIKE
LNSDTPVSLLSAAKGNGSSSLFTPPFGSTLYHKKSSVKTENLAPASNLMKEFDAVAKEST
SRPDHSIPQHGEAFNKNSAAVDLRENDISSKPKLLQRPSRGPLVDISNNIGAGSADRNQN
FGQKRKPGRGSFVSPFKKPRIAKIVTPLKRNDSGASNGFSNSAPQLPSQKGKVSVRYPFH
VARLYMKEYLGDPPSFQSKLENLPDEVRRMNPDIAETHVFNDKSCSGCIGVKSFWEMLSQ
SGASMQYVSKEWVTNHYKWIVWKLASYERCYSTKFSGKLLTICNVLEELKYRYEREVNYG
HRSAIKRILEGDIPSSSMMVLCVSKVYSICNSPVGPQFSLSNTTGNRACAKIELTDGWYS
ITAVLDILLSKKLAAGKLFVGQKLRIWGARFCGWTGPVSPLEASGTTSLLLHINGTYRAH
WASRLGLCKGGAIPLSFLSVKDGGGSVPLTLVGISRIYPVLYRERLSNGGFVVRSERMEA
KEMQSFNQRRCRVVEGITSESQRAKRDAYIGSDHESEEGARVLKILERAAEPELLMAEMS
KEQLNAFASYQAKLEASRQSDLQKSLEKALQAAGLAERDVTPFMRVRVVGLTSKSTPSKC
CPQEGLITIWNPTEKQQSELAEGQAFAVTGLTPISSDSSTLYLQAKGSTAKWRPLSPMAI
EGFEPFFCPRRSVPLSKLGEVPTSREFDIAAVVVFVGQLYTGAHQSKQWVFVADGSPFTL
DSNDESETLMATSFTSPCIETDSFAPINSNLVGSVVSFCNLIKRARDNVNNLWVAEATEN
STYYLNFDHSHCSHLKEASASAERWAKISGSRLEKLRGKVLSIISCS
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgtggcagttgtactccgccgccgggaatgatttccgatggaaaatctccgat
gaagagactaaaatcgaagagccgagcttagccctagcagctcctcagcagctccaatcc
atggccgacctcttgcgtcaaggaagttcgaaattagcggggagtagtgatacaagtttc
acgacgaattttccagtttttcgaactggatccgggaagcctgtggcagtgaagcaggct
tcgatatcaagagctctttcgatccttaatgataaaaacaatttggtcccagacacagga
caagggattagaagagagaacagttttgcctttcaggaagctgctttccagaaaggccca
gggaaagctcttaatgctccagaatcttttttctcttctggcttggagaaacaatttaac
acgtcgaactcaatgttccagacaggctctggtaaagcagttagtatatcttccgcaggt
cttaatagggccaaggcagtgttgggcttggaagaaaatggtgacaatcgatcttcagac
gagcgctttgggtttcggagttcagttcctttcgtggcagtagaggggattgctaacaca
tggtctactaaagcttcagcagcttcattgtctccgtttgatgttaaacttaactcctca
gtttgtgcagcggaggatttagtaccagattttctgcattgtgcagataaacctcctccg
ataaagtttcatactgctggtggtagatcaatatcagtttcttctgaggcattgaaacgt
gcaaggagtttgcttggagatccagagctgggatctcttgtagatgaaaaggatgtggtt
gatccattgttttcttttccaaaagaccaaaaatctgttgatcagtcctccattaaagaa
ttaaactcagatactcctgtttccctcttatcggcagcaaaaggcaatggctcgtcaagc
ctttttacacccccatttggatcaactttgtaccataagaagtcttcggttaaaacagag
aatctcgctccagcaagtaacttgatgaaggagtttgatgctgtggcaaaagaaagcacg
agtaggccggaccatagtattcctcagcatggagaggcattcaacaagaactcagcagct
gttgacctaagagaaaatgacatctcttcaaaacctaaattgctacaaaggccttctagg
ggtcctttggtggatatctcaaataacattggagctggatctgcagatagaaaccaaaac
tttggtcagaagaggaaacctggaagggggagttttgtttctccattcaagaagcctcga
attgccaaaattgtcactcctctcaaaagaaacgattccggtgcttctaatggattctca
aattcagcaccacaattaccctctcaaaaaggaaaagtttcagttcgatatccattccat
gttgcacgattgtatatgaaggagtatcttggggatcccccatcattccagagcaagcta
gagaatctgccagatgaagtgagaaggatgaatccagatattgctgaaactcatgtgttc
aatgataaatcttgctcaggttgcattggagtaaagtctttctgggagatgctgtcgcaa
tcaggggcttctatgcaatatgtctctaaagagtgggttacaaatcactacaagtggatt
gtttggaaacttgcatcttatgagaggtgttatagtaccaaattttctgggaagcttttg
acaatctgcaatgtgcttgaagaattaaagtacagatatgaaagagaagtaaattatggt
catcgatctgcaattaagagaattctagaaggagacatcccatcttcttctatgatggtg
ctttgcgtttccaaggtctattcaatttgcaactccccagttggacctcaattttctttg
tctaacacgaccggaaatagagcttgtgcaaaaattgaactgacagatggatggtattca
attactgctgtcttagatatactattatccaagaagttggctgctggaaagctgtttgtt
ggccaaaagcttaggatctggggagctcgattctgtggctggacaggtcctgtttcacca
cttgaggcgtcaggaacgactagtttgctactgcatataaatgggacatatagagctcat
tgggcatctcgtttggggttatgtaaaggtggtgccattccattatcatttttgtcagtc
aaggatggtggaggttctgttccacttacattggtcggaatttcaaggatatatcctgtt
ctctacagggaaaggttaagtaatgggggtttcgttgtaagatctgaaaggatggaagct
aaagagatgcagtcttttaatcaaagacgctgtagagttgtggagggaataacctcagaa
tctcaaagggcaaagagagatgcgtacattggaagtgaccatgaaagtgaagaaggggca
agagttttgaagatactagagagagctgcagaaccagaacttctgatggcagagatgtct
aaagagcagttgaatgcatttgcatcctatcaagcaaagttggaggcatcgaggcagtct
gacctgcagaaatctcttgaaaaagctttgcaagctgctggacttgctgaaagagacgtc
actccttttatgcgagttagagttgttggtttgactagcaaaagtactccatcgaagtgc
tgcccacaggaaggcttaattacaatttggaatccaactgagaaacagcaatccgagctt
gcagagggtcaagcttttgctgttacagggcttacaccgataagctcagactcgagcacc
ctttatttgcaagcaaaagggtccacagccaaatggcgacctttgtctcctatggcaatt
gagggttttgagccctttttttgtcctcgccgatctgttccattgagtaaattgggtgaa
gttcctacgtccagggagtttgatatcgctgcagtggttgtttttgtggggcagctgtat
acaggagctcatcaaagtaagcagtgggtatttgtagctgatggatccccatttacattg
gattccaatgatgaatcagaaaccttgatggccactagcttcacctcaccatgcatagaa
actgactcatttgcaccaataaactctaaccttgtagggtctgtggtttccttttgcaat
ctcatcaagagagcaagagataatgttaataacctctgggtagctgaagcaacagaaaat
tcgacctattatttaaattttgatcattcacattgttctcatctgaaagaagccagcgct
tctgctgaaagatgggcaaagatatctggttcgagacttgaaaagcttagggggaaagtt
ctatctataattagctgcagctga
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