Nicotiana sylvestris (wood tobacco): 104226218
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Entry
104226218 CDS
T05026
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104226218
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nsy01009
]
104226218
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104226218
03036 Chromosome and associated proteins [BR:
nsy03036
]
104226218
Protein phosphatases and associated proteins [BR:
nsy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104226218
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104226218
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104226218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WDR55
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
104226218
NCBI-ProteinID:
XP_009776445
UniProt:
A0A1U7WGR0
LinkDB
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Position
7:103974719..103981914
Genome browser
AA seq
493 aa
AA seq
DB search
MTLGSEWKFSQVFGEQTPGEDIQDCDILSAMEFDKNGDHLAVGDQGGRVIIFERQTGKEG
LFDRSSRRDSGQFNLPLWQHPEFKYKTEFQSHEPEFDYLKSVEIEEKINKIRWCTKLNRS
LFLLTANDRTIKLWKIKEQKVKKVKQMDINPFVTSENSLLADKSFMSGQSEPSHANGTRL
EWTDKMNGTLPSHLADITNVASRRCRRVYAHAHDFNINSISNNSDGETFLSGDDLRINVW
NLDVRDQCFNIIDMKPKDMEDLTEVITSAEFHPFHCNLLAYSSSRGFIRLVDMRKSALCD
HSVKILQDGGSRGPKTLFSEIIASISDVKYAMDGRHILSRDYMTLKLWDTHMETSPVATY
KIHEHLRPKLSKLYTNDAIFDKFDCCLNGDGLQFATGSYSNHLRIFSCGAENEDGITLEV
RKSPNRKPTSQATTRPRRSSLSNLTRGFYRQGQDSSENETSCNLKSKLLHLAWHPTHNLI
ACSVGSSLFMYHA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgactttgggctctgaatggaagttctctcaagtttttggtgaacaaactcccggtgaa
gatattcaagattgtgatattttatctgcaatggaatttgacaagaatggcgatcatctt
gctgttggagatcaaggtggacgtgtcataatttttgagcggcagactggtaaagaaggt
ctatttgacagaagttctcgacgtgactctggtcagttcaaccttccactttggcagcat
cctgaatttaaatataagacggaattccaaagtcatgaacccgagtttgattatttgaag
agcgtggaaattgaagagaagattaataaaatcagatggtgtacgaaactcaatagatca
ttgtttcttcttacagcaaatgacaggacgataaaactttggaagatcaaggaacagaaa
gtaaagaaagttaaacaaatggacatcaatccatttgtgacttcagagaattctctttta
gctgataaaagtttcatgagtggacaaagtgaaccatctcatgctaatggtaccaggcta
gaatggactgacaaaatgaatggcacattgccctcacatcttgcagatatcacaaatgtg
gcttctagaagatgcagaagagtgtatgcacatgctcatgatttcaacatcaattccatc
tcaaacaatagcgatggtgagacattcctttctggggatgaccttaggataaacgtatgg
aaccttgatgtcagagaccagtgtttcaacatcattgacatgaagccaaaagatatggaa
gatcttacagaggtgattacatcagcagagttccatccatttcactgcaatttgttggct
tatagtagttcacgaggtttcatccgacttgttgacatgaggaaatctgcactatgtgat
cacagtgtgaaaatattgcaagatggggggagccgtggccctaaaacacttttcagtgaa
atcatagcttccatatctgatgtgaagtatgcaatggatggaaggcatatcctaagtcgt
gattacatgactctgaagttatgggacactcacatggagacttccccagttgcaacgtat
aagattcatgaacacctccgccctaagctttccaagctgtatacaaatgacgccattttc
gataagtttgattgctgcctgaatggagatggacttcaatttgcaactggatcttacagc
aatcatcttcgtatattttcttgtggagctgagaatgaagatggcatcacactggaagtt
agaaaaagtccaaataggaaaccaacgtctcaagctactacaaggcctcgaaggtcgtca
ttgagcaacttgactcgaggattttatcgtcaaggacaagatagctcagagaatgagact
tcctgtaatcttaagtccaagttgctgcatctggcttggcatccaacgcacaatttgatt
gcgtgttctgttggaagcagcttgttcatgtaccatgcataa
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