KEGG   Nicotiana sylvestris (wood tobacco): 104226275
Entry
104226275         CDS       T05026                                 
Name
(RefSeq) uncharacterized protein
  KO
K15361  WD repeat-containing protein 48
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    104226275
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nsy03400]
    104226275
DNA repair and recombination proteins [BR:nsy03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     104226275
SSDB
Motif
Pfam: WD40_Prp19 WD40 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 NBCH_WD40 Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st RAWUL Beta-prop_WDR75_2nd ANAPC4_WD40 WD40_RFWD3 Beta-prop_IP5PC_F Beta-prop_Vps41 Beta-prop_DCAF12 WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 104226275
NCBI-ProteinID: XP_009776527
UniProt: A0A1U7W949
LinkDB
Position
1:complement(144076596..144087534)
AA seq 758 aa
MHRVASAGNTSNSVRPRKEKRLTYVLNDADDTKHCAGVNCLAVLKSSAADGCDYLFTGSR
DGTLKRWALAEDGATCSATFESHVDWVNDAVLTGSNRLVSCSSDTTVKVWDGLSEGSCIK
TLRQHSDYVTSLASAEKNSNVIASAGLGGEVFIWDLEAALAPTSKSGDATEEDCSNGVNS
SGSSLPMTSIRPISSSNNISLHTQSQAYIPVAAKGHKESVYALAMNESGSLLVSGGTEKV
VRVWDPRTGSKTMKLKGHTDNIRALLIDSTGRFCISGSSDSMIRLWDLGQQRCVHSYAVH
MDSVWSLASTPTFSHVYSGGRDLSLYLTDLATRESVLLCTKEHPISQLALHDDGIWVATT
DSSVHRWPAEVRNPQKVFQRGGSFLAGNLSFSRARASLEGSTPVPVYKEPSLSIPGTPGI
VQHEILNNRRHVLTKDAAGTVKLWEITRGAVIHNYGEVSFEKKKEELFEMVSIPAWFTVD
TRLGSLAVHLDTPQCFSAEMYSVDLNIPGKPEDDKVNLARETLKGLLAHWLTKRKQRFGS
QASANGEAPPGKDVSTRNSTASRVEVDGNADNDSAVYPPFEFSAASPPSIITEGSQSGPW
RKKITDLDGMEDEKDMPWWVMDCVMNNRLPPRENTKCSFYLHPCEGSTVQILTQGKLSAP
RILRIHKVINYVVEKMVLDKPMDNINSDGTGGQVTHPALGGDGLFRTGLKPWQKLKPSIE
ILCNNQVLSPDMSLATVRAYIWKKPEDLVLNYRVLTSR
NT seq 2277 nt   +upstreamnt  +downstreamnt
atgcaccgtgtagcaagtgcaggcaacacatccaattcggttcggcctagaaaggagaag
aggttgacatatgttttgaatgatgcagatgacactaagcattgtgcaggtgtaaattgt
ttggctgtattgaagtcatcagcagctgacggatgtgactacctatttactgggagtaga
gatggcacgttaaagagatgggcgttggctgaagatggtgccacttgctctgctacattt
gagtcacatgtcgactgggtaaatgatgcagttcttacaggtagtaacagattagtgtca
tgctcctcagacaccacagtcaaggtgtgggatggcttatcagagggctcttgtattaag
acactccgtcagcactctgattacgtcaccagcctagcttcagcagaaaaaaatagtaat
gttattgcatctgctggtcttggtggtgaggttttcatatgggatcttgaagctgcactt
gctccgacatctaaatcaggtgatgcaacagaagaagactgttcaaatggtgtcaatagt
tcaggaagttcattgcccatgacaagcatccgtcctattagttcgagcaataacatttcc
ttgcacacccagtctcaagcatatattcctgtggctgcaaaaggccataaggagtcagta
tatgcattggcaatgaatgagagcggatcccttcttgtttctggtggaactgagaaggtt
gtgcgtgtttgggacccaagaactggttccaagaccatgaagctaaaaggtcatacagat
aatattagggcactactgatcgattctactggcaggttctgcatatctgggtcatctgat
tccatgattagactgtgggatctaggtcagcagagatgtgtgcattcttatgctgtgcat
atggattctgtatggtcacttgctagcactccgacatttagtcatgtttatagcggtgga
agagacctctctttgtacttgacagatttggcaacaagggagagtgtattgctctgcacg
aaggaacaccctatttcgcagttagcattgcatgatgacggcatttgggtggccacaact
gattcatctgtacataggtggcctgcagaagtgcgtaatccccagaaagtttttcaaaga
gggggctcattcttggctggaaacttgtccttttccagggcgagggcttctctagaagga
tctacgcctgtgcctgtctataaagaaccatctcttagcattcctggaactccaggaata
gtgcaacacgagattttgaacaacagaagacatgtcctgactaaggatgctgctggtaca
gtgaagttgtgggagatcactagaggtgctgtgattcacaactatggagaggtttcattt
gagaagaagaaagaagaactttttgagatggtgagcatccctgcatggttcaccgtggac
actaggcttggaagcctggctgtacatctggatactccacaatgcttttctgctgagatg
tactctgttgacctcaacattccggggaagcctgaagatgacaaggttaatttagctcga
gaaactcttaaagggctgttggctcattggttaaccaaacgaaagcagagatttggatct
caagcttcagccaatggggaagccccacctggaaaggatgtatctacaaggaattcgact
gcatcaagagttgaagtagacggtaatgctgacaatgattctgcagtatatccccccttc
gaattttctgcagcatcccctccatcaattattacagagggctctcaaagtggtccatgg
aggaaaaagattactgatttagatggaatggaggatgagaaggacatgccatggtgggta
atggattgcgtgatgaacaatcgcttgcctcccagggaaaataccaaatgtagcttctac
ttgcatccatgtgagggttctactgtccagatccttacccaaggaaagctgagtgcacct
cgcatattaagaattcacaaagtcatcaactatgtcgttgaaaagatggttcttgacaaa
cccatggataatataaattcagatggaactggaggacaggttacacacccagctcttgga
ggagatggcttatttcggactgggttgaagccttggcaaaagcttaagccatctatagaa
atcttgtgcaataaccaggttttatctcctgatatgagcttagcaactgtccgtgcctat
atatggaagaaacctgaagatcttgtcctcaactaccgtgtgttgacgagcaggtga

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