KEGG   Nicotiana sylvestris (wood tobacco): 104226735
Entry
104226735         CDS       T05026                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104226735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nsy03019]
    104226735
Messenger RNA biogenesis [BR:nsy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     104226735
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     104226735
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 104226735
NCBI-ProteinID: XP_070027387
LinkDB
Position
3:188208037..188221529
AA seq 128 aa
MSWASPEDIYLSTSLASYLDKKLLVLLRDGRKLLGTLRSFDQFANAVLEGACDRVIVGDL
YCDIPLGLYIIRGENVVLIGELDIDKEELPPHMTRVSEAEIRRAQKAERDATDLKGTMRK
RMEFLDMD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggcaagtccagaagatatctatctctctacttctcttgcaagctatcttgac
aagaaacttcttgtactgctgcgagatgggcggaagcttttaggaacacttcgttctttt
gaccaatttgctaatgctgttcttgaaggtgcatgtgaccgtgttattgttggtgatcta
tattgtgatatcccattaggactttatattatacgtggggaaaatgtcgtgttaattggt
gaactggacatagataaggaggaacttcctccccatatgacacgtgtttcagaagctgag
ataagaagggcgcagaaagcagaaagggatgctacagatcttaaaggcacaatgagaaag
aggatggaattccttgatatggattga

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