Nicotiana sylvestris (wood tobacco): 104226914
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Entry
104226914 CDS
T05026
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104226914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104226914
Enzymes [BR:
nsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
104226914
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
104226914
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
DUF4136
Motif
Other DBs
NCBI-GeneID:
104226914
NCBI-ProteinID:
XP_009777316
UniProt:
A0A1U7WJ73
LinkDB
All DBs
Position
6:207582115..207588538
Genome browser
AA seq
732 aa
AA seq
DB search
MGVSNCATTLPPSKQYGVTKPLSLAGPTEADIQRTKELEKFLVGAGLYESAEEAAKRERV
LCQLKQIVKDWVKELTRLRGYNDQMVEDANAVILTFGSYRLGVHGPGADIDTLCVGPSYV
NREDDFFFVLHNILAKREEVTELQPVPDAHVPVMKFKFDGISIDILYASISLLVVPDDLD
ISSESMLCNVDEPTVRSLNGCRVADKIIKLVPNIEFFRTTLRCLKFWAKQRGVYSNVTGF
LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCQIEDKELGFSVWDPR
KNPWDRTHQMPIITPAYPCMNSSYNVSASTLRVMTEQFQFGNNICQEIELNKAQWTTLFE
QYPFFESYKNYLQIDIVAADDDDLLVWRGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV
DPSKQCAHRAFFMGLQRRPGELVQEGQQFDIRGTVDEFRHQINMYMYWKPGMEMLVSHVR
RKQIPSYVLPDGYKQSQIARVMSGQLAEKPSCSGSICRSKSGERGLKRKKELEGAEEKQQ
SQDKRPSVSPPRRDSLSPELIVGQKGGMFLQQCSSTVSGGKRKSDEISNNFTSDKMQFAI
LDKDTCAEPSNSQGAQCAESADGCVHRSSGVTNLVEAGTCEDPAHELLQLSHGGHPVGST
GCISLYSSQGDLYRAESKSLSNNVCENGSRSFGDALLELEPRAPRGMLTSLDSIGSEPAQ
KSSIRYSVTSTA
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgggggtttccaattgtgctactactttgccgccgtccaagcagtatggggtgacgaaa
cctttgtctctagctgggcctacggaggctgatattcagcgtaccaaagagttggaaaag
tttttggtcggtgctggactatatgaaagcgctgaggaggctgctaagagagaacgagtt
ctctgccagcttaagcagattgtgaaggattgggtgaaagaacttactcgactaagaggg
tacaatgatcagatggttgaggatgcaaatgctgtcattttaacctttggttcttatcgc
cttggggtgcatggtcctggagctgacatagacaccttatgtgttggaccatcttatgtg
aatcgagaggatgacttcttctttgtattgcataatattttggcgaagagggaagaagtt
actgaactgcaaccagttccagatgcacatgtccccgttatgaagtttaagtttgatggg
atctcaattgatattctctatgcaagcatttctcttttggttgtaccagatgatttggac
atatccagtgaatccatgttatgcaatgttgatgaaccaactgtaaggagcctcaatggc
tgcagggtggctgataaaatcattaaacttgttccaaatattgagttttttcggaccacg
cttcgatgtttaaagttttgggctaagcagcgtggtgtttattcaaatgtaactggattt
cttggtggagtgaactgggctcttctggttgctcgggtttgccaactctatccaaatgct
gttccgagtatgctggtgtctcgtttctttcgtgtatatactcaatggcgttggccaaat
cctgtgatgctttgtcagatagaggataaagaacttggattctctgtctgggatccaaga
aaaaatccttgggaccgtacacatcagatgccaattattacacctgcctatccttgcatg
aactcaagctacaacgtctctgcaagtactcttcgagttatgacagaacaatttcaattc
ggtaacaacatctgtcaggaaattgagctgaataaagctcagtggactacactgtttgag
cagtatcctttcttcgaaagctacaagaactatttgcaaattgacatagttgcagctgat
gatgatgacttgcttgtgtggagaggatgggtcgagtcccggttaaggcagcttacgttg
atgatagagcgggacacatatgggaagttgcagtgtcatccttatccccatgagtatgtg
gacccctccaaacaatgtgcccatcgcgctttcttcatgggtttgcagaggaggccaggc
gagttggttcaagaaggccagcagtttgatattcgcgggacagttgatgagtttagacac
caaataaacatgtatatgtattggaaaccaggaatggaaatgttggtctcccatgttcgt
agaaagcagattccatcttatgttttacctgatggctataagcaaagccaaatagcaagg
gtaatgagtggtcagctggcagagaaaccatcctgcagcggtagtatatgcaggtcaaaa
tctggagaaagagggttgaaaaggaaaaaagagcttgaaggtgcagaagagaagcaacag
agtcaggacaaaagaccatcggttagccctccaagaagggattcactctcacctgaactt
attgttggtcagaaaggtggcatgttcttacaacagtgttcctcgacagtttctggaggg
aagagaaagagtgatgaaatttcaaataatttcaccagtgataagatgcagtttgctatt
ctggacaaagatacctgcgctgaaccaagtaattcacaaggagcacaatgtgcagaaagc
gctgatggatgtgtccaccgttctagtggtgtcacaaaccttgtagaggctggtacatgt
gaggatcctgcgcatgaattgctccaactcagccatggcggtcatccagtgggcagtact
ggttgcatctctctctattcctctcagggcgacttatacagggccgagtccaagtcacta
tcaaataatgtatgtgaaaatggttcaagatcttttggagatgcgttgctggagttagag
ccaagagctccgcgtggaatgttaacatcactggatagcattggatcagagcctgcgcag
aaatcttctataaggtacagtgttacgtcaacagcttga
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