Nicotiana sylvestris (wood tobacco): 104227121
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Entry
104227121 CDS
T05026
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104227121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104227121
Enzymes [BR:
nsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104227121
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
U-box type E3
104227121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
Neurochondrin
zf-RING_UBOX
MLKL_N
zf-C3HC4_4
Arm_2
zf-Nse
KAP
DUF4527
zf-C3HC4_2
zf-C3HC4
zf-NOSIP
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
104227121
NCBI-ProteinID:
XP_009777581
UniProt:
A0A1U7WJW1
LinkDB
All DBs
Position
11:complement(148740196..148747066)
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AA seq
663 aa
AA seq
DB search
MGEEDKGEIVQKLIETVNEISSINEFRNSVKKQYCNLARRLKLLTPMFEEIRDCKEPLPV
DSLKALVSLKLALQSAKDVLKFGSEGSKIYLVLEREQIMSKFQEVTSQLEQALSGIYYEK
LDISDEVKEQVELVLSQFRRAKGRIETPDVELHEDLFSLYSKCNDAVVDHAVLRRLVDKL
QLTELDDLKQESLALHEMVTATDGDPEERIEKMSMLLKKIKDFVLTENPNIDSSAREKSS
TSCGQASADESQKAPVIPDDFRCPISLELMRDPVIVSTGQTYERSCIEKWLEDGHSTCPK
TQQALTSKALTPNYVLRSLIAQWCEANGIEPPKRPGSSRPNKSASACTPAERSKIENLLR
KLKSGSPEEERSAAGEIRLLAKRNADNRVAIAEAGAIPLLVHLLSTPDSRTQEHAVTALL
NLSICEHNKGNIITSGAVPGIVHVLKKGSMEARENAAATLFSLSVIDENKVTIGSSGAIP
PLVALLSEGTQRGKKDAATALFNLCIYQGNKGKAIRSGVVPTLMRLLTEPQGGMVDEALA
ILAILSSHPEGKAAIGAAEAIPVLVDVISSGSPRNKENAAAVLVHLCSGDQHHLVEAQQL
GLMGPLMDLVQNGTERGRRKATQLLERLNRYAEQQKSPQAQAEPQIHHQLSRSPPISTNT
IDS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagaagataaaggagaaatagttcaaaagctgattgaaacagtgaatgaaata
tcgagcattaatgagttcagaaattcagtgaagaagcagtattgtaatttagctaggagg
cttaagttgttgactcctatgttcgaagagattcgtgattgtaaagagccactccctgtt
gactcattaaaagctttggtttctttaaaattagctcttcaatctgctaaagatgtcctc
aaattcggtagcgaaggtagcaaaatttatctggtgctagaaagggagcagatcatgagt
aaatttcaagaggtgacatctcagcttgaacaagctttaagtggaatttattacgaaaag
cttgacatatccgacgaagttaaagaacaggttgaacttgtcctttctcagttccgaaga
gccaaaggaaggattgaaacacctgatgttgaactacatgaagatttgttttctctttat
agcaagtgtaatgatgctgtggtagatcacgctgtcctaaggcggttagttgataagcta
cagctgactgaattagatgaccttaaacaagaatcactagctttgcatgaaatggtaact
gccacagatggggatcccgaggagagaatagagaagatgtcaatgctactgaagaaaatt
aaggacttcgtactgactgagaacccaaacattgattcttctgcaagggaaaagtcttca
acttcttgtggacaagcatctgcagacgagagccagaaggccccagttataccggatgat
tttcgttgccctatatccctggagttgatgagagatccagtcattgtttcaactgggcag
acctatgaacgttcttgtattgagaagtggctggaagatgggcatagcacttgtcccaag
acccaacaagccctcacaagcaaagctctgacacccaactacgtgctgcgtagccttata
gcacagtggtgtgaagcaaatgggattgaaccacccaaaagaccaggtagttctcgaccc
aataaatcagcatcagcatgcacccctgctgagcgctcgaagattgaaaatctcctgaga
aagctcaaatctggcagccctgaagaggagcgctctgctgcaggtgaaatccgccttctt
gctaagcgtaatgctgataatcgtgttgcaatagctgaagcgggtgccattcctctgttg
gtccaccttctctccacacctgattctcgaacccaagagcatgctgttacagcacttctt
aacctttccatatgtgagcataataaaggaaatatcataacctccggagcagtgcctggt
attgtgcatgtgctcaagaaggggagcatggaagcacgggaaaatgcagcagccacccta
ttcagtctttcagttattgatgaaaataaggtcaccattggttcttctggagcaattcct
ccactcgtggcattattaagtgaaggtacccaaaggggtaagaaagacgctgctacagcg
cttttcaatctgtgcatttatcaagggaacaagggcaaggcaataaggtctggtgttgta
cctacactaatgcgactcctcacggaacctcaaggtggtatggttgatgaagcacttgct
attttagcaatcttgtcgagtcacccagaagggaaggcagctattggagctgcagaagca
attcctgttttggtggatgtgatctcaagtggttctccaagaaacaaagaaaatgcagct
gcagttttagtacacctatgctccggggaccaacatcatctagtcgaagcgcagcaacta
ggtttgatgggccccttgatggatttagtacaaaatggaacagaaaggggtagaaggaag
gcaacccaattgcttgaaagactgaacagatatgctgagcagcaaaaatcgccccaggcg
caagccgagcctcaaattcatcaccagctgtcgcggtcaccacccatatcgactaatacc
attgacagttga
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