Nicotiana sylvestris (wood tobacco): 104227436
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Entry
104227436 CDS
T05026
Name
(RefSeq) RNA-binding motif protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104227436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsy03041
]
104227436
Spliceosome [BR:
nsy03041
]
Complex A
U1 snRNP components
U1 related factors
104227436
Complex B
104227436
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
SUS_EPBD
Motif
Other DBs
NCBI-GeneID:
104227436
NCBI-ProteinID:
XP_009777982
UniProt:
A0A1U7WDD0
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All DBs
Position
10:complement(129085882..129093979)
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AA seq
934 aa
AA seq
DB search
MADSAPLPENSTAIANPQQPPESDNKTSQSDPPTAPSLSALPPPPPPSIQPYSTIPPSFR
PATPPAPVPGGVTPLFSPLPNPNLQQQQTSNFPNPAVQPPGVSSVPPAMNAAPTGAVPMT
STQQIMPPYAMHGQLMRPYAPMPNGYPAMHQQGAMPPPGIPRYASPYTPMMRPMFPPRPP
GAIGIIPPLMRPPVPIIRPPIIPPAARPAAIPSIAQTEKPQTTVYVGKISSTAENEFMLS
LLQLCGPVRSWKRAQDPTNGSLKGFGFCEFESAEGVLRALRLLNKLNIDGQELMLNVNQA
TRDYLERYVEKKVVETSKKPKESETEGGEKKEESASGGEKSESAKTSIEPPESTTEESKK
DSGEKGNFDAANFGLVNDEDRQADKEAVEKLKDMLEERLKNKPLPPPPPPPQTAKDGSDN
SNTENPKDGEADRDTAKIEDKNDDELISQSKTSSEHDKADISSPDHRRHDRRSRDRERDL
KREKERELERYEREREQERAKREKERDYKIREDERRYKVREKEWESKEREREYWRKKERE
REKERAQERKWDINEQERESEDGYRKRKHRTSDEERKRRQREKEDDLADRLKEEEEIAEA
KRRADEEQQKKEQEEALKILSGHLANGRGKAVSYEENNLESQDKNIETAHDNLSQGGGVV
QNGADEESVLAATASSDMKHNSNAPAKRLGFGLLGSGKRAAVPSVFNADEDEDTQKEKKM
RPLVPIDYSIDERHMVQPSISESPPAVGAELAKRFSNVNPKEERPDGEKDRHRRTHDRSS
QRDRDKLDEDTKRTRDESRNLDHDRVREPRPDKVKTPDNQKLLDAKQLIDMIPKTKDELF
SYEINWTIYDKNALHERMRPWISKKITDFLGEEEPTLVDYIVSSTQEHVKATEMLERLQS
ILDEEAEMFVLKMWRMLIFEIKKVETGLALRPKS
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggactcagctcctttgccggaaaattccaccgccatcgctaatcctcaacaacca
ccagaatctgataacaaaacctcccaatcagatccacctacggcaccttcattatcagct
ctaccaccaccacctccgccatcgatccagccttactccaccatacctccttcctttcga
ccggcgacgcctccagcacctgtacctggtggtgtaactcctctattctcgcctcttcct
aaccctaatttgcagcagcagcaaacttctaattttccgaatcctgctgttcagccaccc
ggagtgagttctgtaccgcccgcgatgaatgcggcacctaccggagctgttcctatgact
tcgacgcagcaaattatgccgccttatgctatgcatggacaactgatgagaccgtacgct
cctatgcctaatggttaccctgctatgcatcaacagggcgccatgcctcctcccggaatt
ccgcgttatgcatcaccatacactccaatgatgagaccaatgtttcctccacgtccacca
ggtgcaattggcatcattcctcccttgatgcgtcctccagtccctataatacgtcctcca
attattcctcctgctgctaggccagctgccatcccaagcattgctcaaacagagaaacca
caaacaacagtttatgttggcaagatatcgtccactgcagaaaatgagtttatgctttct
cttttgcagctctgtgggcctgttaggagttggaagcgtgctcaagatccgacaaatgga
tctctgaaaggttttgggttttgtgagtttgagtctgccgaaggggttctccgtgcattg
agattgctcaacaaattaaacattgacgggcaggagctgatgttaaatgtcaatcaagca
actcgtgattaccttgaacgttatgttgagaagaaagtagtagaaacctcaaagaagccc
aaagaatctgaaactgaaggcggtgagaaaaaagaagaaagtgcatcaggtggggaaaag
agtgaaagtgcaaagacttctatagaacctccggagtccactacagaagaatcaaagaaa
gatagtggtgagaaagggaattttgatgctgctaatttcggtctggtcaatgatgaagat
aggcaagctgacaaggaggccgtggagaagctcaaggatatgctagaggaaaggctgaag
aataaaccattaccacctccacctccacctccacaaacagctaaagatggttctgataac
tcgaatacggaaaaccccaaagatggggaagcagatagagatacagcaaaaattgaagac
aaaaatgatgatgaattgatcagtcaaagtaaaacttcaagtgagcacgacaaggctgat
attagctcacctgaccatcgtaggcatgataggagaagtagggatcgagaaagggatttg
aagagggaaaaggaaagggaactcgaaaggtatgaaagagaacgtgaacaagaacgagcc
aagagagagaaggagagagattacaagatccgcgaagatgagcgtaggtacaaggtccgt
gaaaaggagtgggaatctaaagaaagggagagggaatattggcggaaaaaagagagagaa
agggagaaagaaagggctcaagagcgcaaatgggatataaatgagcaagaacgtgaaagt
gaagatggttataggaaaaggaaacacaggactagtgacgaggagaggaaacgacggcag
agggagaaggaagatgacttggccgataggcttaaagaagaagaagagattgctgaggct
aagagaagagcagatgaggaacagcagaaaaaagagcaggaggaggcattgaaaatcctt
tctggtcatctggctaatggacgcgggaaagctgtttcctatgaggagaacaatcttgaa
agccaagataagaatattgagacggctcatgataatttaagtcagggtgggggagttgtg
caaaatggggctgatgaagaatccgtattggcagctactgcttcatcggatatgaagcat
aatagcaatgccccagcgaaaagattgggatttggcctactagggtcagggaaaagagct
gctgtcccgtctgttttcaacgcagatgaggatgaggatactcaaaaagaaaagaagatg
aggccattggttccaattgactattccattgacgagcgacatatggtccaaccttccatc
tctgaatcaccaccggctgtgggtgcagaacttgctaagcgattttcaaatgtcaatcct
aaagaagagaggcctgatggagagaaggacagacacagaagaactcatgacaggtccagc
cagagggatcgggacaagcttgatgaagatactaaacgaaccagggatgagagcagaaac
cttgatcatgacagagttcgggaacccaggcctgataaggttaagacgcctgataatcag
aagcttttagatgcaaaacaattgattgacatgattccaaagaccaaagacgagttgttc
tcatatgagataaactggactatttatgacaagaatgcactacatgaaaggatgagaccg
tggatcagtaagaagatcactgattttctaggcgaggaggaaccaacgctggtagactac
attgtctccagcactcaagaacatgtcaaggcaactgagatgctggaaaggctccaaagt
atattagatgaagaagctgaaatgtttgttctgaagatgtggaggatgcttatatttgaa
attaagaaagttgagacaggtttggctttgaggcccaaatcctaa
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