Nicotiana sylvestris (wood tobacco): 104227669
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Entry
104227669 CDS
T05026
Name
(RefSeq) autophagy-related protein 18a
KO
K22991
WD repeat-containing protein 45
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsy04131
]
104227669
Membrane trafficking [BR:
nsy04131
]
Autophagy
Other autophagy associated proteins
Others
104227669
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WDR55
BCAS3_WD40
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_IFT140_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_EML
DUF7099
DUF6764
Beta-prop_RSE1_2nd
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
104227669
NCBI-ProteinID:
XP_009778271
UniProt:
A0A1U7WLV9
LinkDB
All DBs
Position
1:complement(137583646..137587927)
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AA seq
450 aa
AA seq
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MTSALPSSSPWPDSNPFVSPHMSENSPQALESGDRSFLSDLSDISSAITAATADDDEHRA
ETSVTSPAAAATTTTVQNINPNPTSISLPVDSSTPNILYLSFNQDHGCFAAGTDRGFRIY
NCDPLREIFRRDFAGNANGGGGICVVQMLFRCNILALVGGGPEPQYPLNKVMIWDDHQSR
CIGELSFRSEVKSVRLRRDRIVVVLAQKIFVYNFADLKLLHQIETVANPKGLCEVSQVSG
SMVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIVCFALTNDGRLLATASSKGTLVRVFN
TLDGSLVQEVRRGADRAEIYSLAFSSTAQWLAVSSDKGTVHVFNLKVDSAALGVDRPRGA
SESNATSPSAVSHLSFIRGVLPKYFSSEWSVAQFRLPEGLQHIVAFGHQKNTVVILGMDG
SFYRCQFDAAAGGEMTLLEHHSFLKPEENF
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgacctctgccctcccttcctcctccccttggcccgattccaaccctttcgtttcccct
cacatgtcggaaaattcacctcaggctctagaatccggtgatcgttcctttctatctgac
ctctccgatatctcctccgccatcactgccgccacagctgatgatgatgaacaccgcgct
gaaacctccgttacctcccctgctgccgccgctactactactaccgtacaaaatattaac
cctaatcctacttcaatttctcttcccgttgattcttctacaccgaatatcctttacctc
tccttcaaccaggatcacggttgctttgcggcgggcaccgatcgcgggttccggatctac
aattgcgacccgcttcgcgagattttccgccgcgattttgccggtaatgctaatggcgga
ggtggaatttgtgttgttcagatgctttttcgatgcaatattctggcgttggttggaggt
ggcccggaacctcaatatcctttaaacaaggtgatgatatgggatgatcatcaatccagg
tgcatcggcgagctgtcgtttcgatccgaggtgaaatccgtgaggctaagaagggataga
attgtggttgttttagctcagaagatatttgtttacaactttgcggatttgaagctgtta
catcagattgagacggtggcaaatcctaagggtttgtgtgaggtgtcacaggtatcggga
tcgatggttctggtttgtccggggctgcagaagggtcaggtgagagtggagcattacgcg
tcgaagaggaccaagtttataatggcacatgactcgaggattgtgtgttttgcgctcaca
aatgatgggaggttactggctactgctagcagtaagggtactcttgtcagagtgttcaat
actttagatggatctttggtccaagaggtcaggagaggcgcagatagagcagaaatctat
agccttgccttttcttcaactgcacaatggctagctgtttccagtgataaaggaactgtc
catgtgttcaatctaaaggttgattcagcagctttaggagttgatagaccaagaggggca
tctgagtcaaatgctacatctccatcagctgtgtctcatctctccttcattagaggtgtg
ctaccaaagtatttcagctctgagtggtctgtggcgcagttccgattgccagaaggtctg
cagcacattgtggcctttggccaccaaaagaatactgttgtgattcttggcatggatggc
agtttctaccgatgccagtttgatgcagcagctggtggggagatgaccctgttggaacat
cacagtttcttaaagccagaggagaacttctaa
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