Nicotiana sylvestris (wood tobacco): 104227767
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Entry
104227767 CDS
T05026
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00040
Pentose and glucuronate interconversions
nsy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104227767
Enzymes [BR:
nsy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104227767
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104227767
NCBI-ProteinID:
XP_009778380
UniProt:
A0A1U7WVW3
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Position
3:11404153..11412791
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AA seq
495 aa
AA seq
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MPPVISIFLFCFITSFPPLISATLNLTQPFPESVVQDVQRRVNESIVRRQIVETTVRDSS
NKCLTGNPIDDCWQCDSNWAKNRQRLADCGIGFGLGAMGGKNGQIYVVTDSSDRDTVNPT
PGTLRHAVVQEEPLWIVFAADMVIKLKHELIVNSYKTIDGRGANVHITGGGCITLQYVSN
VIIHNVHIYNCVPSGNTNIRSSPTHVGYRGKSDGDGISIFGSRNIWVDHCALSHCTDGLI
DAIMGSTAITISNSYFSHHDDVMLLGHDDKYLPDSGMQVTIAFNHFGEGLVQRMPRIRRG
YVHVVNNDFTEWQMYAIGGSASPTINSQGNRYTAPDDPNLKEVTKREDTDTGKWNDWNWR
SDGDVMVNGAFFVPSGQGISTQYVKAYSVDPKSALLIDQLTKNAGVLGGPRDNSMSMSSK
GGITGGSGSGSGHAKSTSGDVDMFGMIFSGTGASSAGSSPSHTTTPILLSFLIILTLYIF
TKQGGQLSIPLFLLL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctgtgattagcattttcttattctgcttcattacttcctttccccctctaatt
agtgctacactcaatcttacccaacccttccctgaatctgtggttcaagatgtacagagg
agggtaaatgagtctattgtgagaagacaaatagttgaaacaactgttagagacagtagt
aataaatgtctaaccggaaatccaatagacgattgctggcaatgcgactcaaactgggcg
aaaaaccgacagaggttagccgactgcggcattgggttcggtctaggtgcaatgggtgga
aaaaacggtcagatctacgtagtcaccgactcctccgacagagacaccgttaaccctact
ccgggcactctccggcacgccgtcgttcaagaggaacctctctggatcgtgttcgccgcc
gacatggttattaagctaaaacacgagcttattgtgaacagttacaaaactatcgacggc
cgcggcgcgaatgttcacattaccggcggcggatgcataacgttacagtacgtgagcaat
gtgattatacacaatgttcatatttacaattgtgtcccttcgggtaatactaatatacgg
tcgagtccaacgcatgttgggtatagaggcaaatctgacggtgatggtatatccatcttt
ggatctcgaaatatctgggttgatcattgtgcattgtctcattgtaccgatggcttgatt
gatgctatcatggggtccactgctattactatttcgaatagctattttagccatcatgat
gatgttatgctcttgggacatgatgataaatacttgccagattcaggaatgcaggtgacg
atagcgtttaatcattttggagaagggttagtgcaaagaatgccaaggattagaagagga
tatgtacatgtggtgaacaacgatttcacagaatggcaaatgtatgcaatcggtggtagt
gcaagtcctactattaatagtcagggcaatcgctatactgctcctgatgaccctaatttg
aaggaggtgacaaagcgggaggacacagacactgggaagtggaacgactggaactggagg
agcgatggcgacgttatggttaatggagcattttttgtgccttcgggccaaggcattagc
acccaatatgtcaaagcttacagcgtcgaccccaaatctgcccttctcatcgatcagctc
accaaaaatgccggtgtccttggtggtcccagggacaacagtatgagcatgtcatccaaa
gggggcattaccggaggcagcggcagcggcagcggtcatgccaagtccaccagcggcgat
gtcgacatgttcggaatgatattcagcggtactggtgcatcttctgctggatcatctcca
tcgcatacaaccaccccgatcttactatcctttttaattattctgactttgtacatattc
accaaacaaggtggtcaattatctataccattatttcttttgctatag
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