KEGG   Nicotiana sylvestris (wood tobacco): 104227796
Entry
104227796         CDS       T05026                                 
Name
(RefSeq) small ribosomal subunit protein RACK1
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nsy03019]
    104227796
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nsy04147]
    104227796
Messenger RNA biogenesis [BR:nsy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     104227796
Exosome [BR:nsy04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   104227796
  Exosomal proteins of colorectal cancer cells
   104227796
  Exosomal proteins of bladder cancer cells
   104227796
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_SCAP Beta-prop_EML Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_SPT8 ANAPC4_WD40 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_NWD2_C PROPPIN Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd eIF2A Beta-prop_WDR19_1st Beta-prop_DCAF4 Cytochrom_D1 WDR54 Beta-prop_RSE1_2nd Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 104227796
NCBI-ProteinID: XP_009778426
UniProt: A0A1U7WMC0
LinkDB
Position
10:complement(20798384..20800639)
AA seq 326 aa
MSQESLVLRGTMRAHTDWVTAIATPVDNSDMIVTSSRDKSIIVWSLTKDGPQYGVPRRRL
TGHGHFVQDVVLSSDGMFALSGSWDGELRLWDLQAGTTARRFVGHTKDVLSVAFSADNRQ
IVSASRDKSIRLWNTLGECKYIIQDGDSHSDWVSCVRFSPNNLQPTIVSGSWDRTVKIWN
LTNCKLRATLAGHTGYVNTTAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLESGSIIHS
LCFSPNRYWLCAATESSIKIWDLESKTIVDDLKVDLKQESEMSAEGTASGKNKVIYCTSL
GWSADGSTLFSGYTDGLIRVWGIGRY
NT seq 981 nt   +upstreamnt  +downstreamnt
atgtcgcaagaatcactagtactccgtggcacaatgagggcccacactgactgggtcaca
gccatcgccaccccagttgacaactccgatatgatcgtcacatcctcacgtgacaaatcc
atcatcgtttggtcactcacgaaagacggcccacaatacggcgtcccccgccgccgcctc
acaggccatggacacttcgttcaagacgtcgtcctttcatccgacggcatgttcgctctt
tccggatcttgggacggtgagctccgtttgtgggatcttcaagctggaacaaccgcccgt
cgtttcgtcggacacactaaggatgttttgtccgtagcattttctgctgataaccgtcag
atcgtgtcagcatcccgtgataagagcatcaggctttggaacactttgggtgagtgtaag
tacattattcaggacggagattcgcattctgattgggtctcatgtgttcgtttcagcccg
aataatcttcagccaactatcgtatccgggtcgtgggacaggactgtaaaaatatggaac
cttaccaactgtaagctccgtgctacgcttgctggacacactgggtatgtgaataccacg
gcggtgtctcctgatggttctttgtgtgctagtggaggaaaggatggagtgattttgttg
tgggatttggctgaagggaagaaattgtactcccttgagtcgggttctattattcactcg
ctttgttttagcccaaataggtactggttgtgtgctgccactgagtcgagtattaagatt
tgggatttggagagcaagactatcgtggatgatttgaaagttgatctgaagcaagagagt
gaaatgtctgctgagggaactgcttctggcaaaaacaaggtcatatactgcactagtttg
ggctggagtgctgatggaagcacacttttcagtggatacacagatggcttgattagagtg
tggggtattggccgttattag

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