Nicotiana sylvestris (wood tobacco): 104227906
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Entry
104227906 CDS
T05026
Name
(RefSeq) amino acid transporter AVT1A-like isoform X1
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104227906
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nsy02000
]
104227906
Transporters [BR:
nsy02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
104227906
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GFIT
Motif
Pfam:
Aa_trans
Trp_Tyr_perm
Motif
Other DBs
NCBI-GeneID:
104227906
NCBI-ProteinID:
XP_070020940
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Position
12:complement(53724658..53738755)
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AA seq
537 aa
AA seq
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MARNKDGENEEDEFFWEESDDNVEAGHINTEEDMTEDDEHEEGEGRPSRSSSFVSQQWPK
SVRESMDIYTIAASPNFGSFQPVASFKYSTSDISSQNNLVWSVKTPLLSIDGKSHQKSDL
DVPGRSQASWPEKVSSRMITGELPISHGCSLVQTIFNGTNVMAGVGLLSTPYTVKQAGWA
SMAVLVLFAVVCCYTACLMRYCFESKEGITSFPDMGEAAFGKYGRILVSIILYMELYSSC
VEFIILDGDNLKQLYPGAHIYLFGSRLDSMHLFAIISVLIILPTVWLKDLRLISYLSVGG
LISTALVVVCLLLLGTVDQIGFRQTAPVVNWSGIPFAIGVYGYCYSGHSVFPNIYQSMAD
KTKFTTAVIVCFTLCILLYGGAAIMGFLMFGQSTQSQITLNLPKHAFVSNVALWTTVVTP
ITKYSLLLNPLARSIEELLPAALATSYWFFIVLRTALVISTLCVAFLLPFFGIVMALIGS
LFSVLMAVIIPALCFLKILGNKATNNQITLSVAIVLLGIVSAFMGTYTSLSRLAEEY
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggaacaaagacggggaaaacgaggaagatgagtttttctgggaagaatcagat
gataatgttgaagctggtcatattaatacagaggaagacatgacagaagatgatgaacat
gaagaaggagaaggtaggccttctcgttcctcttcatttgtttctcaacaatggccaaag
agtgtcagggagtctatggatatttacacaattgctgcatcaccaaactttggatccttt
cagcctgtagccagctttaagtattcgacttctgatatctctagtcaaaataacttggtt
tggagtgtaaagacccctttgctgtctattgatgggaagagtcaccagaaaagcgacctt
gatgtgcccgggagatcacaagcttcatggccagaaaaggtttcatcacgtatgatcacg
ggagaacttccaattagccacggatgtagccttgttcaaactatattcaatggaacaaat
gtcatggctggagttggacttctttctacaccttatacagtgaaacaagcaggttgggca
agcatggcagtgcttgttctttttgcagtagtctgttgttatactgcttgtcttatgcga
tattgctttgaaagcaaagagggaattacatcatttccggacatgggagaagctgcattt
ggaaaatatggacgtattctagtatctattattttgtacatggagctatattcctcttgt
gtagaatttatcatacttgatggagataatctcaagcagctataccctggagcacacatt
tacttgtttggttctcgattggactccatgcacttgtttgcaatcattagtgttcttatc
attctgcccacagtttggttgaaagatttacgattgatctcttacctttcagtcggaggt
ctcatttcgacagctctagtggtcgtatgtcttctcttacttgggacagtagatcaaatt
ggatttcgtcagacggctccagtggtaaattggagtggtattccatttgcaataggtgtc
tatgggtattgctattcagggcactctgttttcccaaatatctatcaatctatggctgac
aaaaccaaatttacaacagcagtcattgtgtgctttactttgtgtattctcttatatggt
ggtgctgcaatcatgggatttcttatgtttggtcaatctacgcaatcacagattactctg
aatttgccaaaacatgcttttgtttctaatgttgcattatggacgacagtagtaactcca
attaccaaatattccttgttactgaacccgttagctagaagtattgaggagttgcttcct
gcagctttggctactagttactggtttttcattgtcctaaggacagcattggttatatct
acactttgtgttgcatttcttcttcccttttttggtattgtgatggctctaataggctcc
ctttttagtgtactcatggcggtaattataccagctttgtgctttctgaaaattttgggg
aataaggctacaaataatcagatcacactcagtgtagccattgtcttattggggatagtc
agcgcgttcatgggaacatacacctctctgtcacgacttgctgaggaatactga
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