Nicotiana sylvestris (wood tobacco): 104227948
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Entry
104227948 CDS
T05026
Name
(RefSeq) uncharacterized protein isoform X1
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104227948
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104227948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
Motif
Other DBs
NCBI-GeneID:
104227948
NCBI-ProteinID:
XP_070009214
LinkDB
All DBs
Position
8:150525432..150607268
Genome browser
AA seq
2525 aa
AA seq
DB search
MEDKDTELLCKVSANHLFLAQFEPFRATLRSLRARNPELSRAILQTIVAHGGRLDSIIWS
RSCSSPALLAFLCTIELLHFNEPTSQLWSFDAATLKLRAEFCLYLQTVISRVSESISSSK
LDEEAVENVDLNGDGSGINEDLKGLSESLRVLVKIADVGLRRLRPDLIEMDDTVESEGNS
GGDIIVEEEEMTCLRKLFLENADIFDVLSLNIEKQVGWVENEDSGMAITVRTVVKHKEVE
DRVLKSLQKSIQIAHLDAMRDCLMNNDVDGAVSHIRFLHLDYGVDEEEYRMVSRDLLRRV
LPGKDDYGDAWFEMRDKFLSVYGEALSSRCTPLVKMIQVIHDEMLLEEIESLKASESEQI
PLPLQRLKVFVRELNSETTLNNRNSLLETVITSCMREMYHYARVRGLHVLECIMDTALSA
VRKEELQEASDILLLLPRLQPLVAVLGWDLLSGKTGLRRKLMQLLWTSKSQALRLEDSPH
YGNRSNEVSCIEHLCDLLCYQLDLASFVACANSGKSWSLKSSLLLSGKEFMQQGNEDVQW
DPFVENFVLERLSVQSPLRVLFDVVPSIKFQDAIELISMQPITSNLAAWRRMEDIEFMHM
RYALESAVLALGEMEKNIGEGVGNGQFNFCYLKDLKNHLDAINNIFRKILMVNIIISLLH
MDGLSLNLTPCASSSSSSESSNISRGQQLEDATHDGRNKTVVMFIGQLLDILRQYLPSSN
SEKENNGEVNMSAGIKEAIEWRIMNAKRFIEDWEWRLSILQCLLPFSERQWRWREALTIL
RAAPSKLLNLCMQRAKYDIGEEAVNRFSLPPEDKATLELAEWVDSAFGRASVEDAVSRAA
DGTSPVQELDFSSLRAQLGPLPAILLCIDIAATSAKSSNISWKLLSQAQVILSEIYPGNS
PKIGSTYWDQIREVAMISVIKRVLKRLQEQLEQDKPPALQDILTGEMILLSSKDFHRQGH
KERALAMLHQMIEDAHMGKRQFLSGKLHNLARALADEETEREQVKEDGSRSDRKGLLLYS
RNGIIGLGLKTLKQLPITSAAGDNNIPSGGYDVKETGKRLFGTFSSRMTTFLSQFVLYLA
AIGDIVDGTDTTHDFNYFSLVYEWPKDLLTRLVFEQGSTDAAEKAAEIMNADFVHEVISA
CVPPVYPPRYGHGWACIPVIPTYTENNSENRVISPSCREAKPGSFTPSSGDVELPLYPLQ
LDIVKHLIKLSPVRAVLACVFGSSILYRGRDTTVSRSLKSCSLQTPDADRLFFEFALDQS
ERFPTLNRWIQMQTNLHRVSEFAIMADHTTRDGKDVPECKTAMKRFRDHDSDAESEVDEL
AGSNNISTNAQEIKKEVGGSSDPCHDSLKSESSDCTTVFLSFDCENEGPYEKAVERLIDE
GKLMDALAISDRFLQIGASDRLLQLLVERGEENILSGQSQGYSGNHNWSHSWQYCLRLKD
KQLAARLALKYLHRWELDAALDVLTMCSCHLLGNDPIKDNVVQMRQALQRYSHILSADNR
FHSWLEVESECKEDPEGLALRLAEKGAVSAALEVAESEGLSIELRRELQGRQLVKLLTAD
PLNGGGPAEASRFLSSLRDTADALPVAMSAMQLLPNLRSKQLLVHFFLKRRDNNLSESEV
SRLNSWALGLRVLAALPLPLQQKCSPLHEHPHLILEVLLMRKQLQSASLILKEFPSLRDN
NMILIYAAKAIAVSISSPSRDPRISILTPRARQKTKMGTPTRSSFTSSLSNFQKEARRAF
SWVQTGDKGASKDTHRKRKSSGVMQSERVAWEPTTSIQEDRVTLFSADGQERLPAVAIAE
MWMLTGDPKKDEAVRSSHRYESIPDITLFKALLSMCSDESASAKGALDLCVGQMKSVLSS
LQLPENATMETIGRAYHATETFVQGLLFAKSLLRKLSGGTDLSSSSERSKDADDASSDAA
SSSVGSQSTDELSEVLAQAETWLGRAELLQSLLGSGIAASLDDIADKESSERLRNRLTLD
ERYSMAVYTCKKCKIDVFPVWNAWGHALIRMERYAQARVKFKQALQLYKGDAATVIMEII
GTIEGGPPVDVSSVRSMYEHLARSAPAILDDSLSADSYLNVLYMPSTFPRSERSRRSQEA
LNDSSSNNTHFEDGPKSNLDSVRYLECINYFQEYARQHLLDFMFRHGHYKDACLLFFPPN
SVPPPPQPSSGVVTSSSSPQRQDPLATDYGTLDLLCDLCTAYGAMPVLEEVLSGRTSNIT
SQDPSVNKHTTAALSRICNYCETHKHFNYLYKFQVTKKDHVAAGLCCIQLFMNSTSQEEA
IRHLENAKMHFEEGLSARHKAGESTKLITKGIRGKSASEKLTEEGLVKFSARVAIQIDVV
KCFNDAEGPQWKHSLFGNPNDPETFRRRCEIAETLAERNFDLAFQVIHGFNLPAVDIYAG
VAASLAERKRGSQLTEFFRNIKGTIDDDDWDQVLGAAINVYANKHKERPDRLIDMLTSSH
RKVLACVVCGRLKSAFQIASRSGSVADVQYVAHQSQRRHYMLMHFQFLICANNGSLSTCS
LGSRM
NT seq
7578 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaagacacagagctgctgtgtaaagtcagcgcgaaccatcttttcttagct
caattcgagccattccgagccactctacggagtcttcgtgctcggaatcctgaactctct
agagcaattcttcaaacaattgttgcgcatggcggaagattagattcgattatctggtcc
cgctcttgctcttctcctgcactcctcgctttcctctgcaccattgagctcctccatttt
aatgaacctacttcccaactttggtcttttgatgccgctactcttaaattaagggctgaa
ttctgtttgtacttacaaactgtgatttcaagggtttcagaaagcatctcgagttcaaaa
ttggacgaagaagctgttgaaaatgtagatttaaatggagatggttcgggtattaatgaa
gatttgaagggtttaagtgaaagtttgagggttttggtgaaaattgctgatgttggtttg
aggcgcttgaggccggatttgattgaaatggatgacacggtagaaagtgagggaaattca
gggggagatattatagtggaagaagaggaaatgacgtgtttgaggaagctatttttggaa
aatgcagatatctttgatgttttgtctctaaatatagagaaacaagttggttgggttgag
aatgaggattcgggtatggcaatcacagtcaggacagtagtgaagcataaggaggttgag
gatagggtgcttaaatcactgcaaaagtccattcaaattgcacatttggatgctatgagg
gactgcctaatgaataatgatgtggatggagctgtttctcatattcgatttctacatttg
gattatggggtcgatgaggaggagtatcgcatggtttcaagagatctactcaggagggtg
ttacctgggaaggacgattatggagatgcttggttcgagatgcgagacaaattcttatca
gtttatggggaagcactttcatctcgttgtacacctcttgttaagatgatacaggtcatt
catgatgaaatgctcttggaagagattgagagtctcaaagcttctgaaagtgagcagatt
cctcttcctcttcagcgtctcaaagtttttgtccgagaactgaattctgagacgacttta
aacaacagaaattcattgctggagactgttattacttcttgtatgagagaaatgtaccat
tatgctcgtgttcgtggcttgcatgtactggaatgtatcatggatactgccctgtctgct
gtgagaaaggaggaactgcaagaagccagtgatattcttttgctgttgccccgacttcag
cctcttgtagccgtcctcggttgggatcttttgtctggtaaaacgggtttaagaaggaaa
ctgatgcagcttctgtggacaagtaaatcacaagctcttcgcctggaagactctccacat
tatggaaatagatcaaatgaggtgtcttgcatcgaacatctctgtgatctcctgtgttat
cagcttgatcttgcttcttttgtagcatgcgcgaattctggcaagtcatggagtttgaag
tcctcgctactgttgtctggtaaagagtttatgcaacaaggaaatgaagatgtgcaatgg
gatccctttgttgaaaattttgtgctagaaagattatctgtacagagtcctttgcgggta
ttatttgatgtggttccaagcattaagtttcaagatgctattgaactgattagcatgcag
ccaattacttccaatctagcagcctggaggaggatggaggacattgaattcatgcacatg
cgttatgctttggagtctgctgtccttgcacttggagagatggaaaagaatatcggtgag
ggagtaggaaatggccaattcaatttttgctacctgaaagatctgaagaatcatcttgat
gccatcaacaacattttccgcaagatactgatggtgaacattatcatctctcttctgcat
atggatggcctttctctcaatttgacaccttgtgcttcatcaagcagctcatctgaatca
tcgaatatatcgagggggcaacaattggaggatgcaactcatgatgggcgaaataagacc
gttgtaatgtttatagggcaactattagatatattgcggcaatatctaccatcatcaaac
tcagagaaggagaataacggggaagtaaatatgtctgctggtatcaaagaagccatagaa
tggagaattatgaatgccaaaagatttattgaggattgggaatggcgtttgtcaattttg
cagtgccttctgccattctctgaaagacagtggagatggagggaggctcttacgatatta
cgtgcagccccatccaaactgctaaacctctgtatgcaaagggcaaagtatgatattgga
gaagaggctgtcaaccgtttctctttgcctccagaagacaaagctacactagagctggct
gaatgggtagatagcgcctttggaagagcatctgttgaagatgctgtttcccgtgctgct
gatgggacttccccggttcaagaactggatttctcgtctttacgtgctcagttaggtcct
ctaccagctattctcctgtgcattgatatagctgcaacttctgcaaaatcttcaaacata
tcctggaagctgttaagtcaggctcaagttatattgtccgagatttaccctggtaattcc
cctaaaattgggtcaacctactgggatcagattcgtgaagtggcaatgatatctgtaatc
aagcgcgttcttaagcgtctgcaggaacaactggaacaggataagcctccagctcttcaa
gacattttaactggagaaatgatccttttatcctcaaaggattttcaccggcaaggccat
aaggaacgtgcactagccatgctgcatcaaatgattgaagatgctcatatggggaagaga
cagtttcttagtggtaagctccacaatttggcaagagctttagcagatgaagaaacagag
agggaacaggttaaggaggatggttcacgttctgacaggaaaggattgttactgtacagc
agaaatggtattattgggcttgggttgaaaaccttgaagcagcttccgataacttcagca
gctggtgacaacaatataccttctggtggctatgatgtcaaggaaactggaaagagatta
ttcgggacgttcagctccagaatgaccacatttctatcacaatttgttctctaccttgct
gccattggggacattgttgatgggactgataccactcatgacttcaactacttctcacta
gtgtatgaatggcctaaagaccttttaactcgtctagtgtttgagcaaggcagtaccgat
gcagctgaaaaggcagcagaaattatgaatgctgattttgttcatgaagtgatttctgct
tgtgtgcctccagtttatcctccaagatatggtcatggttgggcttgcatcccagtaatt
cctacatacactgagaataactctgaaaatagagtaatatccccttcatgcagagaggcc
aagcctgggtctttcaccccttcctcaggggatgttgaattacctctttatcctctccaa
ttggatatagtgaagcatctcatcaaattatccccagttagagctgtattagcgtgtgtc
tttggaagttctatactttatcgtggcagggatactactgtatctagatctctgaaaagt
tgctcgttacaaactcctgatgctgataggttattctttgagttcgctcttgaccaatct
gagaggttccctaccctgaatcgctggatacagatgcagaccaatcttcatcgagtctca
gaatttgcgataatggctgatcacacaacgagggatggcaaagatgtacctgaatgcaaa
actgctatgaagcgatttcgtgatcatgatagtgatgctgaatctgaagttgatgaactt
gctggtagcaataatatatcaacaaatgcccaggagatcaagaaagaagtgggaggatct
tctgatccatgccatgattccctaaaatccgaaagttctgattgtactacagtttttctt
tcttttgattgcgagaatgaaggcccatatgagaaagccgtggaacggttgattgatgaa
ggaaaattgatggatgctcttgccatttctgatcgtttcttgcaaattggagcctcagat
cggttgcttcagttactagttgaacgcggagaggaaaatatattgtccggacagtctcaa
ggttactctggcaaccataattggagccatagctggcagtactgtctgcgtttgaaggat
aaacaactggcagctagacttgcactcaaatatttgcatagatgggaactggatgctgct
ttggatgttctcactatgtgcagctgccacttgcttggaaatgatcctattaaagataat
gttgttcagatgagacaagctctccagaggtacagccatatattaagtgcagataaccgc
ttccacagctggctagaggtggagtccgagtgtaaagaagatcctgagggtcttgccctt
agactagctgagaagggagctgtttctgctgctttagaagtggctgaaagtgaagggcta
tctattgaactgcgcagagagctgcaggggcgtcaacttgtgaagcttctaacagcagat
cctttaaacggtggaggccctgcagaagcttcacgttttctttcttctttacgtgacact
gcagatgctttacctgttgcaatgagtgcaatgcagcttttgcccaacctacgatcaaaa
cagcttcttgttcactttttcctgaaaagaagggataataatttatcagagtcggaagtt
tccaggctcaactcctgggctttagggttacgtgttctggctgctttgccattaccattg
cagcaaaaatgctctcccctacacgagcaccctcatttgattctagaagttttgctgatg
agaaaacaacttcaatctgcatctctgatacttaaggaattcccttccttgagagacaac
aatatgattcttatatatgctgccaaagctatcgctgtcagcattagttctccttccagg
gatccgaggatttcaattttgactccaagagcaagacagaagacaaaaatgggaacacct
acaaggtcatcattcactagtagccttagtaattttcaaaaagaggcccgcagagcattt
tcttgggtccaaactggagacaaaggtgcatcaaaggatacacataggaagagaaagagc
tctggtgtaatgcaatctgagagagtggcgtgggagccaactacttccattcaggaagac
cgtgttacattattttctgcagatgggcaagaacggctgcctgctgttgctattgctgag
atgtggatgctcacaggtgaccccaagaaggatgaagctgtccgttcatcgcatcgatat
gaaagtatcccggatattactcttttcaaggcactgctttcaatgtgttcggatgagagt
gcatctgccaaaggtgctttggacttgtgtgttggccagatgaaaagtgtattaagctcc
ctacagttacctgagaatgcaacaatggaaactattggccgagcatatcatgccacagaa
acttttgttcagggcctgcttttcgcaaaatccctccttagaaagctttctgggggcact
gacttgtcaagtagttcagaaagaagtaaggatgctgatgatgcatcttctgatgctgca
agctctagtgtgggtagtcagtcgactgatgagctgtctgaagtactggcacaagctgag
acgtggctaggacgtgctgaattgctgcaaagtcttttgggttccggaatagctgcgtca
ctggatgatattgctgataaagagtcatctgagcgacttcggaatagattaactctagat
gaaagatacagcatggctgtctacacttgcaagaagtgtaagattgatgtttttcctgtg
tggaatgcatggggtcatgctctgattaggatggagcgctatgcacaagctcgtgtgaaa
tttaagcaagcacttcaattgtacaagggtgatgctgcaactgttataatggagataatt
ggcaccattgaaggaggtccaccggtagatgtttcatctgttcggtccatgtatgagcat
ttggctcgaagtgcaccagccattttagatgattctctctctgctgattcctatctcaat
gtcttatacatgccatccacttttcctcggtcagagagatccaggagatctcaagaagcc
ttgaatgacagttcttccaacaatacacacttcgaagatggacccaagagcaacttggac
agtgttagatatcttgaatgcatcaattattttcaagaatatgctcgtcaacatctgctt
gatttcatgtttcgacatgggcattacaaggatgcttgcttgttatttttccctcccaat
tctgttcctccacctcctcaaccatcttcaggcgttgttacttcatcttcttcccctcaa
cgacaagatcctttggcaacagattatgggacccttgatctattgtgtgatttgtgcact
gcttatggagccatgcctgttttggaggaagtactgtcaggaagaacttcaaatataaca
tcgcaggatccatcggtgaacaaacatacaactgcagcactttctcgcatctgtaattat
tgcgaaactcacaagcatttcaattatttatacaagtttcaggtaacaaagaaggatcat
gtggcagctgggctttgttgcatacaattgtttatgaattctacttctcaagaagaagct
ataagacacttggagaatgccaagatgcattttgaggaaggcttgtcagcgcgacataaa
gcaggagagtctactaagcttattaccaagggcatccgaggaaaaagtgcctctgagaaa
ctaactgaagaaggacttgtcaaattttctgctagagttgctattcagatagatgttgtc
aaatgctttaatgatgcagaaggaccacagtggaaacattcactttttgggaatccaaat
gatcctgaaactttcaggaggaggtgtgaaattgcagagactcttgctgagaggaatttc
gacttggctttccaggtgatccatgggttcaaccttccagctgttgacatatatgctggt
gttgctgcatcacttgctgagagaaagaggggaagccaactcacagagttctttaggaac
attaaaggcaccattgatgatgatgattgggatcaggttttgggagcagccatcaatgtg
tatgcaaacaagcacaaagagcgacctgaccgcctgattgacatgttgactagtagccac
aggaaagtacttgcttgtgttgtctgcgggcgtctcaaaagtgcattccaaattgcatcc
agaagtggaagtgtggctgatgttcagtatgttgcacatcagtctcaacgcaggcattac
atgctaatgcacttccagttcttgatatgtgcaaacaatggctcgctcagtacatgtagt
ctgggttctagaatgtga
DBGET
integrated database retrieval system
