Nicotiana sylvestris (wood tobacco): 104228015
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Entry
104228015 CDS
T05026
Name
(RefSeq) small RNA degrading nuclease 1-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104228015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nsy03009
]
104228015
Ribosome biogenesis [BR:
nsy03009
]
Eukaryotic type
Pre-60S particles
RNases
104228015
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Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DEDDh_C
BRAP2
Motif
Other DBs
NCBI-GeneID:
104228015
NCBI-ProteinID:
XP_009778700
UniProt:
A0A1U7WWS7
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Position
12:129274804..129280155
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AA seq
520 aa
AA seq
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MTLNKYLGLGQRLHLPHSRAALAMDLKFASSAKKEVLVEIVKLAQKRQMKGSSGGWKDFL
RSYDKKLGVSLSDPSKRSVDDLLAFLKTFSQEDDIKLFKKVFQCYSNREAVEKLQKKSPD
SESAEQGLVRLTFEHPQYPTEYSFPSHEEGWLVTRRTKKSNFVKSKKAMIAIDCEMVLCQ
DGTEALVRICAVDDKLEVKLNEFVNPNKPIADYRTEITGITAGDLDGVSCSLADVQISMK
KLLSHGTILIGHSLHNDLRALKIDHARVIDTSYVFKYWDQPSNRRPSLSNLCKSVLGFEL
RKKDSPHNCLDDACTAMKLVLAKIERGVDCIIPLVREEVQEPKIAKLLVHRIPVALHSEE
LHKVVPGDFTIEVKANKKGQADKYSASVNFKNQQEANEAFEKLEGNQDKDPVGRPQKLVS
FHLDSGISGVLCVCKMAPNNLAIEVNPMKRSSEDEETVREPKKPRIEDQCAELKEAGAGC
NQCETHVKEIERLKKELSHRDEEISNLNKLIVNLVRKQGL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaccttaaataaatatttggggctaggtcaaagacttcacttgcctcactctagagcc
gcccttgcaatggatttgaagtttgcctcctcagcgaagaaagaggttctagtcgaaatt
gtcaagttagctcaaaagcggcagatgaaagggagtagcggagggtggaaagattttttg
agatcgtacgacaagaagttaggtgttagcttgagtgacccgtcgaagaggtccgttgat
gatttgcttgcgtttttgaagacgtttagccaagaggatgacataaagctttttaaaaag
gtgtttcaatgctattccaatcgagaggctgtagagaagcttcagaaaaaatccccggat
agtgaatccgccgaacagggactggttcgtttaacttttgagcaccctcaatatccgaca
gagtactcgtttccatcacatgaggagggctggttagtcacgagaaggactaaaaaatct
aatttcgtaaaatcaaaaaaggcaatgattgcaattgattgcgaaatggttctttgccaa
gatggaaccgaagctttagtcagaatctgcgctgtggatgataagttggaggttaaactc
aatgaatttgtgaatccaaacaaaccaattgcagactacagaactgagattactggaata
accgcaggagatttagatggagtttcttgttcattggctgatgtacagatttccatgaag
aagctattatcacatggaaccatattgattggccacagtttacacaatgaccttcgtgct
ttgaagatagatcatgcaagagtgattgacacatcttatgtcttcaaatattgggatcag
ccatctaatagaagaccttctttaagtaatttgtgtaagtctgtgttaggttttgaactt
cgaaagaaggactctccacataattgtctggatgacgcatgcactgcaatgaaacttgtt
cttgccaagattgaacgtggagttgattgtatcataccgttggttcgtgaggaggtgcaa
gagcccaagattgcaaagctacttgtccacagaataccagtggctcttcatagcgaagag
ttacacaaagttgttcctggggactttaccatagaagttaaggctaataaaaaagggcaa
gcagacaagtattctgcctctgtcaatttcaaaaatcagcaagaggcaaatgaggcattt
gagaagcttgaaggcaaccaagataaggatcctgtcggacgaccacaaaagctcgtttca
tttcatcttgattccggtatatcaggggttttgtgtgtttgtaagatggctcccaataac
ttagctatagaggttaacccaatgaagaggtcatctgaagatgaagagaccgtgagagag
ccaaagaaaccgagaatagaagaccaatgtgcagagctcaaggaggctggtgcaggttgt
aatcagtgtgaaacgcatgtgaaggagattgagaggctaaagaaagaattaagccacaga
gacgaagaaatctccaacttgaacaaactcattgttaaccttgtgagaaaacaaggattg
taa
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