Nicotiana sylvestris (wood tobacco): 104228329
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Entry
104228329 CDS
T05026
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6 isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104228329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104228329
Enzymes [BR:
nsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104228329
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
HECT type E3
104228329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
104228329
NCBI-ProteinID:
XP_070011895
LinkDB
All DBs
Position
9:136454314..136523610
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AA seq
1033 aa
AA seq
DB search
MFFSGDPSTRKRVDLGGRSSKERDRQKLLEQTRLERNRRLWLRQQNCAAIKIQKCFRGRK
EVEAERSKVRENFLKTYGDRCHRVDRQCFGPDSDFLCQLLFFFNPTYTNDVSILVETCRS
LLELVRDSGDIVSLFADMDCASDLGLVRYRLKKFVHACIRAVYGNRNKLRDQLFMESEKS
CTSAILLLDAVTLLIDLRFPWACSSVTYLLQRNIYSLFREIILIGKERNFPASNRVVASF
ERVLGLIIPHVGQSTCSCASVDPRCCFPSQILTIPFLWRFFPHLKEVFASPSVSRHYFHQ
MALCMKEHVNVLPPDIEIDLPGYASLLGNLLEVARLAFALPESFTMAVDFATVATFLLEA
LPSLQSSNMGSKENSSVSEDDMVIDDEQTEKVLNLGLEQQITNAIDPRFLLQLTTVLLGG
FSPLNGLHSGQLDEKHVAAVSAVCAFLHVTFNILPLERIMTVLAYRTELVAVLWNFMKQC
HENQKWSSLSEQSAYLPADAPGWLLPLAVFCPVYKHMLMIVDNEEFYEQEKPLSLKDIRC
LIVILRQALWQLLWLNPMAPANFGKSTTDIFAMKKHPLEFLQHRVSVVASELLSQLQDWN
NRRQFTPPSEFHADGVNEYFISQAMTENTRANDILKQAPFLVPFTSRAKIFTSQLAAARE
RNGSQGLFARHRFRIRRDHILEDAFNQLNALSEEDLRGLIRVTFVNELGVEEAGIDGGGI
FKDFMENITRAAFDVQYGLFKETADHLLYPNPGSGMSHDQHLQYFHFLGTVLAKAMFEGI
LVDIPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKHYEGDVSNLELYFVIVNNEYG
EQTEEELLPGGKSIRVTSENVITFIHLVANHRLNFQIRQQSSHFLRGFQQLIQKEWIDMF
NEHELQLLISGSLDGIDIDDLRAHTNYTGGYHKEHYIVDMFWEVVKSFSLENQRKFLKFV
TGCSRGPLLGFRYLEPLFCIQRAGGNASEEALDRLPTSATCMNLLKLPPYRSKEQMEQKL
LYAINADAGFDLS
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgtttttctctggtgatccttcgacgaggaagcgggtcgatttgggtgggcgcagctcc
aaggaacgtgaccgacagaagcttctggaacagactcgtttagagcggaatcgtcgcctc
tggttgcgtcagcagaactgtgctgccatcaaaattcagaaatgcttcagaggtagaaag
gaggtggaagctgagcgttctaaagttcgcgagaatttcttaaaaacttatggggatcgc
tgccaccgtgttgacaggcaatgtttcggtccagattcagattttctatgtcagctactt
ttctttttcaatccaacatacactaatgatgtttccatcctcgtggagacatgccgatcg
ctactggagcttgttcgagatagcggggacattgttagcctctttgctgatatggactgt
gcctccgatcttggcttggtgagatacaggctaaagaaatttgttcatgcttgtattcgg
gctgtttatggaaacaggaataagttgagagatcaactatttatggaatctgagaagtcc
tgtacatcagcaatcctcttgttggatgcagtaacgttgctgattgatttaaggtttccc
tgggcttgcagcagtgtcacctatcttcttcaaagaaatatatattccttatttagggaa
atcattctgattggcaaggaaagaaactttccagcttccaacagggttgtagcttcattc
gagcgtgtgcttggactgattatacctcatgttggtcaaagcacttgttcttgtgcaagt
gttgacccacggtgttgcttcccttcccagattcttacgattccatttttatggcggttt
tttcctcacctaaaagaggtctttgcaagtccatctgtgagtcgtcattattttcatcag
atggcattatgcatgaaagagcatgttaatgtcctccctcctgatatagagattgatctt
cctggctatgctagccttctagggaatctactcgaagttgctaggctagcttttgccctg
ccagaatcattcactatggctgttgattttgcaactgttgcgacttttttgttggaagca
ctcccttctctccaatcatcaaatatgggaagtaaagaaaattcttcagtgtctgaggat
gatatggtcattgatgatgaacaaacagaaaaagttctgaatttgggtttggagcaacag
ataaccaatgctatagatccacgttttcttctacagctgactactgttttactgggaggg
ttttcacctctcaatggtttacatagcggccagcttgatgagaaacatgtggcagctgtt
agtgcagtttgtgctttccttcacgtgactttcaacattttgccgcttgaacgtattatg
actgtgctagcctatcggacagagctagttgctgtcctttggaacttcatgaagcaatgt
catgaaaatcagaaatggtcatcactgtcagagcaatcagcatatttgccagcagatgct
cctggatggctgctacctttggctgttttctgcccggtttacaagcacatgcttatgatt
gtcgataatgaggagttctatgaacaggagaagccattatctctgaaggatatcagatgt
ttgattgttatccttagacaggccttgtggcagctcctctggctgaatcctatggcgcct
gctaactttggtaaatcaacaactgatatctttgctatgaagaagcatccattagagttc
cttcagcatagggttagtgttgtagcatctgaactcctatcacagttacaagattggaac
aacagacggcaatttacacctcctagcgaatttcatgcagatggtgtaaatgagtacttc
atatctcaggcaatgacggagaacactagagccaacgatatactaaagcaagctccattc
ctggtgccatttactagccgagccaaaatatttacttcacagctagctgcagcaagagag
aggaatgggagccagggtctttttgctaggcatagattcagaattagaagagaccatatt
ctggaagatgcttttaaccaattgaatgcattatcggaggaggatctccgaggactgata
cgtgtaaccttcgttaacgaacttggagttgaggaagctggtatagatggtggtgggata
ttcaaggatttcatggagaatattactcgagcagcttttgatgtacaatatggattattt
aaggaaactgcagatcatctactctatccaaatcctggatctgggatgtctcatgatcaa
cacctccagtattttcattttcttgggacagttcttgctaaggcaatgtttgaaggcatt
ctcgttgatattccatttgcgacattctttttgagcaagttgaagcagaagtataactat
ttgaatgaccttccttccttggatcccgaattatatcgtcatctcattttcctgaagcat
tacgaaggtgatgtttcaaatctagagttgtacttcgtcattgtcaacaatgagtatggg
gagcaaactgaagaggagctgcttcctggtgggaaaagcatacgtgtaactagtgagaat
gtcatcacctttattcatcttgtcgccaaccatcgtttaaactttcagatccgtcagcaa
agttctcattttctgaggggcttccaacagctaatacaaaaggagtggattgacatgttt
aatgaacatgaacttcagcttcttatttctggatcacttgatggcattgacattgatgac
cttcgagctcataccaattatacaggaggttaccataaggaacattacattgtcgatatg
ttctgggaggttgtgaaaagcttttctctggaaaatcagaggaaatttttgaagtttgtg
acagggtgttcacgaggacccttgcttggatttagatatttggagcctttgttctgcata
caaagagcgggcgggaatgcttccgaagaagctcttgatcgattgccgacatcagctact
tgcatgaatcttttaaagcttccaccatatagaagcaaggagcagatggagcagaaattg
ttatatgccataaatgctgatgctggttttgatttaagctga
DBGET
integrated database retrieval system
