Nicotiana sylvestris (wood tobacco): 104228422
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Entry
104228422 CDS
T05026
Name
(RefSeq) probable pectate lyase P59 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00040
Pentose and glucuronate interconversions
nsy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104228422
Enzymes [BR:
nsy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104228422
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
104228422
NCBI-ProteinID:
XP_009779191
UniProt:
A0A1U7WPG1
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Position
9:145983673..145989407
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AA seq
447 aa
AA seq
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MGGPKLKYSFFFLFIIFATIIRNLMAHIGDFDEVWRRRAEEAREYARQIYEPNPENVTLA
FNQKVRDTMKELRQVTVSNSTRRGLGTKKYKGPCMVTNPIDRCWRCDPNWADNRKRLADC
AMGFGYKATGGKDGEIYIVTDNSDDYAEPKPGTLRYAVIQKEPLWIIFERSMTIRLHQEM
IMQSDKTIDARGANVHIAKGAGITLQYIKNVIIHGLHIHDIVEGSGGMVRDAVDHIGIRT
VSDGDGISIFGASNIWIDHVSMKKCYDGIIDAVEGSTGITISNGHFTDHNEVMLFGASDS
SSIDQVMQITLAFNHFGKRLVQRMPRCRWGYIHVVNNDYTHWNMYAIGGSMHPTIITQGN
RFIAPPDIFKKQVTKREYNPEEVWKQWTWRSEGNLFMNGAYFIESGDPDWSKKHKELYDG
ISAASAEEVTWITRFAGALGCKEGKAC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggaggacctaagttaaagtattcgttcttctttctatttatcatttttgctacaata
atacggaacctaatggctcacattggtgactttgacgaggtgtggcggaggagagccgaa
gaagcaagagaatacgcccgtcagatttatgagcccaaccctgaaaatgtcacccttgca
tttaaccagaaagttcgcgatactatgaaggaactaaggcaagtgacagttagcaatagc
acaaggaggggtctagggaccaaaaagtacaagggaccttgcatggtcacaaatccaatt
gataggtgctggagatgtgaccctaattgggctgacaataggaaaaggctagctgattgt
gcaatgggttttggatacaaggccaccggtgggaaggatggcgaaatctacatcgtcacc
gacaattcagacgattatgctgaaccaaaacctggaactctccgttatgccgttatccaa
aaggagccattgtggatcatattcgaaagaagtatgaccatcaggttacaccaggagatg
atcatgcagagtgacaagaccatcgatgctcgtggggctaatgttcacattgctaaaggc
gctggcattaccctccagtacatcaagaacgtgatcatccacggactccatattcatgac
attgtcgaaggaagtggtgggatggttcgtgatgcagtggaccatattggcatacgtacc
gttagtgatggagatggaatttctatttttggtgcgtccaatatatggattgatcatgtc
tctatgaagaaatgctatgacggaatcatagacgctgtagaaggatcgactggtatcact
atatccaatggacatttcactgaccataatgaggtgatgttgtttggtgcaagtgacagt
tcttcaatagatcaagttatgcaaatcacattagctttcaatcattttgggaagagattg
gtgcagagaatgccaaggtgccgatggggatatattcatgttgttaacaatgactatact
cactggaatatgtatgccattgggggtagtatgcatccaactatcattacccagggtaat
cgttttattgctcctcctgacatcttcaagaaacaggtaacaaagagggagtacaaccca
gaagaagtgtggaagcagtggacatggagatcagagggaaatctattcatgaatggagca
tacttcattgaatctggtgatccagattggtccaagaaacacaaagagctttatgatgga
atatcagctgcctcagctgaagaagttacttggataactagatttgcaggtgcacttggt
tgcaaagaaggaaaggcttgttaa
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