Nicotiana sylvestris (wood tobacco): 104228660
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Entry
104228660 CDS
T05026
Name
(RefSeq) poly(A) polymerase PAPalpha-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104228660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104228660
Enzymes [BR:
nsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
104228660
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
104228660
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
CHASE3
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
104228660
NCBI-ProteinID:
XP_009779467
UniProt:
A0A1U7WHN4
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MVGSESLTPSRPEAAPSPLKKYGVTKPLSSAGPTDADLQRNASLEKFLKDSGLYESEEET
ERREEVLRQLDQIVKSWVKQLTHQRGYTDQMVEDANAIIFTFGSYRLGVHGPGADIDTLC
VGPSYVNRDEDFFIILHDILAEKEEVSELQPVPDAHVPVMKFKFQGISIDLLYASISLLV
VPEDLDISDQSVLYSVDEPTVRSLNGCRVADQILKLVPNAEHFRTTLRCLKFWAKRRGVY
SNVTGFLGGVNWALLVARICQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGF
LVWDPRKNPKDRTHHMPIITPAYPCMNSSYNVSPSTLRVMMDQFQFGNKICEEIELNKAQ
WAALFKHYLFFEVYKNYLQVDIVAADNDDLLAWRGWVESRLRQLTLKIERDTNGMLQCHP
YPNEFVDLSKPCPHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFKQDVSMYTYWRPGMDI
YVSHVRRKQIPPFVFPDGYKRPRQSRNASHSTPEKVARGCMSPEERHPKRKQEAETVGVN
WGKLGKRASISPQRRIGSVSPLGGSSRSDGSSQIIISDESQKELESSCLLDTSDDNSLHR
CSRNDASLSDSSVCAPDSLNYTISRKSILSGLPREVDLDSSNTKSFPSQEMLRPFQDICT
RNVQTFQVLQNDEKGETLGSFHQDNTGQLNELTGCAERGERVAVSNSNIQNLTCEGDTSL
ADRISQLGDGCLSGNGVLGNGLAEKSQVECRSLWSTFYQFFIKAILHIRVSVITVHMPIF
QCSISFSFC
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggtgggttccgagagcttaacgccgtcgcgaccagaggcggcgccatcgccgctgaag
aagtatggtgtcacgaagcctttgtctagtgcggggcccaccgatgcagatcttcaaaga
aatgcatcattagaaaagtttttgaaggactcagggttgtatgagagcgaggaagaaaca
gaaaggagagaagaggtgctgcgtcagcttgatcagattgtaaaatcatgggtgaaacaa
ttgactcaccagagaggctacactgatcaaatggtggaggatgcgaatgctatcatattc
acttttggttcttatcggctaggagttcatgggcctggagctgacatagacacattgtgt
gttggtccctcttatgtcaaccgtgatgaagatttctttatcattctgcatgatattttg
gctgaaaaggaagaagttagtgaacttcaaccagttcctgatgctcatgtcccagttatg
aaattcaaatttcaaggaatatctattgatctcctttatgcaagtatatctctcttagtt
gtccctgaagatttagatatctcagatcaatctgtactctacagtgtggatgagccaact
gttcgaagtctcaatggatgccgggttgctgatcaaatattgaaactagtacctaatgct
gagcacttccgcacgactctcagatgtctcaagttttgggcaaaaaggcgtggtgtttat
tccaatgttaccggatttctcggtggtgtcaattgggctcttttggttgctcgcatttgc
cagttttatcctaatgccatccccagtatgcttgtttctaggttcttcagagtttataca
caatggcgttggccaaatccagtgatgctatgcccaattgaagaggatgaacttggtttt
cttgtttgggatcctcgcaagaatccaaaagaccgaactcatcatatgccaattataact
cctgcttacccttgcatgaactccagctataatgtctcgccaagtactcttcgagtaatg
atggaccaatttcagtttggtaacaagatttgtgaggagatagagttgaataaagcacag
tgggcggcgctttttaagcattatcttttctttgaggtgtacaaaaactatctgcaggtt
gacattgtagcggcagataatgatgatttgctagcttggagaggctgggtggaatcccgg
cttagacaactaacactaaagatcgagcgtgacacaaacgggatgttgcagtgccatccg
tatccaaatgaatttgtagacttgtctaagccatgtccacattgtgctttttttatgggc
ttgcagaggaaacagggtgtaaaagtgcaagaaggacagcagtttgatattcgtggcaca
gttgatgagtttaagcaagatgtaagcatgtacacttattggagaccaggcatggatatc
tatgtatctcatgttcggaggaagcaaattcctccatttgtctttccagatgggtataag
aggccacgtcaatctaggaatgcaagtcatagtactcctgagaaagttgctagaggctgc
atgtctcctgaagaaaggcatccgaagaggaagcaggaagctgaaacagttggtgtaaat
tgggggaaactagggaaacgtgcttctatcagtccgcaaaggaggatagggtcggtttct
cctctaggtggttctagtaggtctgatggatcatcacagataatcatttctgacgagtca
cagaaggagctcgagagttcttgcctactggacacttctgatgataattcattacatagg
tgcagcagaaacgatgcctctctgagcgacagttctgtttgtgcacctgatagtttaaat
tatactatctcaaggaaatccattttatccggacttcccagagaagttgatttagatagt
tctaacacaaaatccttcccaagccaggagatgcttcgtccgttccaagacatttgcact
agaaatgtccaaacttttcaggtgttgcagaatgatgagaagggggagactttgggatca
tttcatcaagataatactgggcagctcaatgaactgactggttgcgcagaaagaggtgaa
agagtggctgtatcaaattccaacattcagaacctcacttgcgagggtgatacaagcttg
gctgatcggatttcacaactaggggatggatgtttaagtgggaatggagtcttgggtaat
ggcttggccgagaagtcacaggtggagtgcagaagtctctggtctactttttaccaattt
ttcatcaaagctatactgcatatacgagtttctgttattactgttcacatgcctattttc
cagtgttcaatctcattttctttttgttag
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