Nicotiana sylvestris (wood tobacco): 104228745
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Entry
104228745 CDS
T05026
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104228745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsy03041
]
104228745
Spliceosome [BR:
nsy03041
]
Common components
Common spliceosomal components
SR proteins
104228745
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM_2
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
104228745
NCBI-ProteinID:
XP_009779572
UniProt:
A0A1U7WHZ4
LinkDB
All DBs
Position
1:111485851..111492570
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AA seq
253 aa
AA seq
DB search
MSHFGRTGPPDITDTYSLLVLNITFRTTADDLYPLFDKYGKVVDIFIPRDRRTGESRGFA
FVRYKYADEAQKAVDRLDGRVVDGREMAVQFAKYGPNAERIQQGRIIEKVSRIKGSSRSR
SPRRRYRDDHYRDREYRRSRSRSVDRYERDRYKRRERDYRRRSRSRSLSPDYDRDRGRGR
DKKHHRRSPFDSASPPRRSPSPYRKESPRGSLSPKKESPEKRSHIERSPTPRSRSPPGRA
MDSRSPSPRADEE
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttcggaagaactggacctccggacatcaccgatacttactctcttctcgtc
ctcaacatcacattccgtaccacagccgatgatctgtatcctcttttcgacaagtacggg
aaggttgtcgatatcttcattccgcgagacagaaggactggtgagtcacgtgggtttgca
tttgttcgttacaagtatgcagatgaagcacagaaggctgtggataggctggatggaaga
gtggttgacgggcgggaaatggcagttcaatttgccaagtatgggccaaatgcagaacgg
attcagcaagggaggatcattgagaaggtttcaagaatcaaaggaagctcgagaagcaga
agccctcgtagaagataccgtgatgatcactatagagatagagaatacaggagaagtagg
agcagaagtgttgatcgttatgagcgtgataggtataagcggagagaacgggattatcgc
cgtcgaagtaggagccgcagcttaagtccagactatgatcgagatcgtggcaggggacgt
gacaaaaaacaccataggaggagtccatttgacagtgcctccccacctcggcgtagcccc
agtccttacaggaaagagtcccctcgtggaagcttatcacctaaaaaagaaagccctgag
aagcgcagtcacattgaacgctctccaactcctcgaagccgatcccctcctggtcgagca
atggattcacgaagcccttctcctcgtgctgatgaggagtaa
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