Nicotiana sylvestris (wood tobacco): 104228982
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Entry
104228982 CDS
T05026
Name
(RefSeq) probable beta-D-xylosidase 5 isoform X2
KO
K15920
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00520
Amino sugar and nucleotide sugar metabolism
nsy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
104228982
Enzymes [BR:
nsy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
104228982
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
Motif
Other DBs
NCBI-GeneID:
104228982
NCBI-ProteinID:
XP_009779847
UniProt:
A0A1U7WIT2
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Position
8:98428064..98431166
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AA seq
794 aa
AA seq
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MEKHFLLSPIFFIVLFTIPCNSQIHACYKSDPNTSTYGFCNISLAYTDRAKDLVSRLTLQ
EKVGQLVNSASGIPRLGVPAYEWWSEALHGVSNTGPGVRFNATVPGATSLPAVILSAASF
NVLLWYTLGKVVSTEARAMHNVGLAGLTYWSPNVNVLRDPRWGRAQETPGEDPLVVSKYA
VNYVRGLQEVDGEEYFSSQNKLKVSSCCKHYTAYDLDDWKGIDRYHFDANVTAQDMEDTF
QPPFKSCVEEGHVSSVMCSYNRVNGVPTCADPNLLKGVIRDQWSLDGYIVSDCDSIEVYY
DAIHYTATPEDAVALALKAGLNMNCGDYLGKYTEKAVNLSKVDVSIIDQSLIYNYIVLMR
LGFFDGDPKMQPFGNLGPSDVCTNDHQSLGIEAAKQGIVLLDNNGVLPLSPSNVKHLALI
GPNANATGTMLSIYAGVPCRYTTPFQAMQKYVASITYEPGCANVQCTDSSQIKAAAKAAA
AADVVVLVMGLDQSIERESLDRVNLTLPGFQEKLVKDTTKAANGSVVLVIMSASPIDVTF
AKNNKKIGAIFWVGYPGQDGGDTISQVLFGDYNPGGRSPFTWYPQEYVDNVPMNDMNMRA
NASRNFPGRTYRFYNGKSIYPFGHGLSYSSFSSFIISAPSTIVVKQKTTLDSDTILLSNM
TTQANGQALDISNLNCQSLRFNITVGVKNNGKMDGSYVVIVFWKPTNMGGGLTGAPNIQL
VGFERVWVEKGKTATVTTKLDVCKDFSLADAYGKRKLVTGLQTVVVGSSSERQVKHPFNI
RLATKEEYGAVHYV
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacattttctactttctccaatattcttcatagttctcttcacaataccatgt
aattcccagattcatgcatgttataagagtgaccctaataccagcacttatggtttttgc
aacatttctttagcttatacagacagagcaaaagacttagtatcacggttaactctccaa
gaaaaagtgggacagctagttaactctgcatcaggcattcccaggcttggtgtgccagct
tacgaatggtggtctgaggcgctgcacggggtgtcaaacacggggcctggagtacgtttc
aatgcaacagtacctggagcaaccagtctcccagctgtcattctttctgctgctagtttt
aatgttttgttatggtatactttaggaaaggttgtatcaactgaggctcgggccatgcac
aatgttggcctggctggattgacctattggagccccaatgtgaatgtccttcgtgacccc
agatggggaagggctcaagaaacaccaggggaggaccctctagtggtctcaaagtatgct
gttaactatgtccgaggcttgcaagaagtcgatggagaagaatatttcagcagtcaaaac
aagcttaaagtctcaagctgttgtaaacattacactgcttatgatcttgatgactggaag
ggaattgatcggtatcattttgacgccaatgtgacagcacaggatatggaggatacattc
cagccaccatttaaaagctgtgtagaggagggtcatgttagcagtgtgatgtgctcatac
aatcgcgtgaatggagttccaacttgtgctgatccaaatttgctcaaaggagtgattagg
gaccaatggagtctagacggatacattgtctctgattgtgactcaattgaagtttactat
gatgcaatacactatactgccacacctgaggatgcagtcgcccttgctctgaaagcaggt
ctgaacatgaattgtggggattatctaggaaagtatacagaaaaagcagtgaatctgagc
aaggtggacgtgtctataattgatcagtcactgatatataactacattgtactaatgagg
cttggattctttgatggcgatccaaaaatgcaaccatttggaaatcttggaccatctgat
gtgtgtaccaatgatcatcagtccttgggaattgaagctgcaaaacaaggaatagttttg
ctagacaacaatggtgtgcttcctctgtcaccaagcaacgtcaaacacttggctcttata
ggtcccaatgctaatgccactgggacaatgctaagtatctacgcaggggtaccttgccgc
tacaccacccctttccaggcgatgcagaagtatgtagcgagcataacatatgagccagga
tgtgcaaacgttcagtgcactgattcaagccaaatcaaggcagcagccaaggctgcagct
gcagccgacgtggtggtgcttgttatggggcttgatcaatccatcgagagagaatcactg
gatagagtgaacttgacattgccagggtttcaagaaaagcttgtaaaagacaccactaag
gcagcaaatggatcagttgttctagtgattatgtcagccagtcctattgatgtaaccttt
gctaagaataataaaaagatcggcgcaattttctgggttggctatcctggtcaagatggc
ggtgataccatttctcaagtcctctttggagattataatccaggtgggaggtctcctttc
acttggtatccacaagaatatgttgacaatgtaccaatgaatgacatgaacatgagagca
aatgccagtagaaactttcctggaagaacttatagattctataatggaaaatcaatatat
ccatttggccatggactaagctactcaagcttttcttcgttcatcatttcagcgccttcc
accattgtcgtaaagcaaaagacaacccttgactcagataccattcttttatctaacatg
actactcaagccaatggccaagcccttgatatttcaaacctgaattgccagagtttaagg
tttaacatcacagttggggtcaagaataatggcaaaatggatggatcctatgtggttata
gtgttctggaagccaacaaatatgggaggaggactgactggagcgcctaatatacagctg
gtggggtttgaaagagtctgggtggagaaagggaagacagcaacagtgacaacaaaattg
gatgtctgcaaagatttcagcttagctgatgcatatgggaagaggaagttagtcacaggg
ctgcagactgtagttgttggttcttcaagtgagcgccaagttaagcatccgtttaacatt
aggctggctacaaaagaagaatatggagctgtacattacgtctaa
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